Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1944 |
Symbol | |
ID | 4669903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 2105384 |
End bp | 2106334 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639823154 |
Product | zinc/iron permease |
Protein accession | YP_970302 |
Protein GI | 120610624 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0428] Predicted divalent heavy-metal cations transporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000552942 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00979273 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGCGCTTTC CTGGCGGGCC GGATGCCGGC CGCGGCAAGC CCTGTGTTTT CGAGAATCGA GCGCGTACAG CTATGACTTT GATCGCAATC ATCCTGGCCA CCCTGGCCGC GGGTATCGGC AGCGTGTGGG TGGCGGCCCT GCTCATGCGG GCCGGCTGGG GGGACGGCCG CTCGGGCATC GGCCCGCGGC ACCTCCTGAG CTTCGCCGCC GGCGCGCTGC TGGCCACGGC CTTCATGCAT TTGCTACCCG AGGCCTTCGA GAGCCAGGCC GGCGCGCACG AACTCTTCGC CACGCTGCTG GTGGGGCTGG TCTTCTTCTT CCTGCTGGAC AAGGCGGAGC TCTGGCACCA CGGCCACGAG CACGGCGTGG GGCCGGCCAA CGACGACCCG GGTACGGGGG GAGGGCACGC GCACGCCCAT GGACACACCC ACGATGGCCA CGGGCACGAT GCACACGGCC ATGGGCACCA CTCCCACGCC CATTCCCACT CGCATCGCGG CTCCGGCGGC TGGGCCCTGC TCACGGGCGA CAGCGTCCAC TGCTTCGGCG ACGGTGTCCT GATTGCCTCC GCCTTCCTGG CCGACCTGCG CCTGGGCGCC ATCGCCGCGC TGGCCGTCCT GGCCCACGAA GTGCCGCACC ACATGGGCGA TCTGGTGGTG CTGCGCCAGT CCAGCGGCGA CCGGCGCGCG GCCCTGGTCA AGGTGTCCCT GGCCGGAGCG GTCACCGCGC TCGGGGGCGT GGTGGGCTAT TTCCTGGTGG GCGAGCTGCA GGACTGGCTG CCGTATTTCC TGGCCATCGC GTCCAGCAGC TTCGTCTATG TGGCGCTGGC CGACCTCATC CCCCAATTGC AAAAGCGCCT GACGGCCGCG CAGACGCTGG CGCAGATCGC GTGGCTGCTG GGGGGCATGG CGGTGGTCAC GCTGGTGAGC GGGATGGCGC ACGCACATTA A
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Protein sequence | MRFPGGPDAG RGKPCVFENR ARTAMTLIAI ILATLAAGIG SVWVAALLMR AGWGDGRSGI GPRHLLSFAA GALLATAFMH LLPEAFESQA GAHELFATLL VGLVFFFLLD KAELWHHGHE HGVGPANDDP GTGGGHAHAH GHTHDGHGHD AHGHGHHSHA HSHSHRGSGG WALLTGDSVH CFGDGVLIAS AFLADLRLGA IAALAVLAHE VPHHMGDLVV LRQSSGDRRA ALVKVSLAGA VTALGGVVGY FLVGELQDWL PYFLAIASSS FVYVALADLI PQLQKRLTAA QTLAQIAWLL GGMAVVTLVS GMAHAH
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