| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1884 |
|---|
| Symbol | rpsP |
|---|
| ID | 4666814 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 2041249 |
|---|
| End bp | 2041506 |
|---|
| Gene Length | 258 bp |
|---|
| Protein Length | 85 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639823093 |
|---|
| Product | 30S ribosomal protein S16 |
|---|
| Protein accession | YP_970242 |
|---|
| Protein GI | 120610564 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0228] Ribosomal protein S16 |
|---|
| TIGRFAM ID | [TIGR00002] ribosomal protein S16 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.11426 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGTGA TTCGACTCTC CCGCGGCGGC TCCAAAGGCC GTCCGTTCTT CAACATCGTC
GTTGCCGACA AGCGCGTGCG CCGCGACGGC CGCTTCATCG AGCGCCTGGG CTTCTACAAC
CCCACCGCCA AGGAAGGCGA AGAAGGCCTG CGCATCGCCC AGGACCGCCT GACGTACTGG
AAGAGCGTGG GCGCCCAGGT GTCCGACACC GTCGAGCGCC TGATCAAGCA GGCCGCCAAG
AAGGCCGTCG CCGCCTGA
|
|---|
| Protein sequence | MVVIRLSRGG SKGRPFFNIV VADKRVRRDG RFIERLGFYN PTAKEGEEGL RIAQDRLTYW
KSVGAQVSDT VERLIKQAAK KAVAA
|
|---|
| |