Gene Aave_1869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1869 
Symbol 
ID4668626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2026715 
End bp2027887 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content72% 
IMG OID639823078 
Producthypothetical protein 
Protein accessionYP_970227 
Protein GI120610549 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.19198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGATT CGCTCTTCGG CGACGACCTT CCGCCGCCTC CTGCGCCCTC TCCCGCACCG 
CCCGGGCCGG CCACCGAATC TCCCGCCGCC GCGCCACGCC GTCGGCCGCG GGCCGGTGGC
GTCCACCCCA TCGAGCCCGA CCCCGGCCTG CTGGCCCTCG CCGCCGCCCT GCCCCAGCAG
CTGCGGCTCG GCGGCTCCTC CTGGAGCTAC CCCGGCTGGA AAGGCCTGGT CTGGGAAGGC
GAGCACTCCG AATCCACCCT GGCGCGCCAG GGACTGGCCG CGTATGCACG GCACCCGCTG
ATGCGCACCG TGAGCATCGA CCGCGGTTTC TACAAGCCTC TCACCGTGAG CCAGTACGCG
GGCTACGCCT CGCAGGTGCC CGACGACTTC CGCTTCATCG TGAAGGCGCC AAGCTTGGTG
ACCGATGCAC TGGTGCGCGC CGAGGACGGC CGCGGGCGCG CGCCGAACCC GGCCTTCCTC
GACCCCGCAC TGGCACTCCA GGAATTCGTG GCGCCCGCGC TGGAAGGCCT GGGGGCCAAG
ATCGGAGCGT TGGTGTTCCA GTTGAGCCCC TTGCCGCTGG CGCAGCTCCA TCGCCTCGAA
GGCACCATCG CCCAGCTAGG CGCCCTGCTG CGCGCGATGC CGCCGCTCGC CCCCGCCGCA
CCGGACGGCG TGCTGGCCGT GGAGGTGCGC GATCCGGAGT GGCTGTCGCC GGAATACGAG
CCGCTGTTCG CCGAAGCGCT GCTCTCGGCC GGCGCCACCT ATTGCCTCGG GCTGCATGCC
AAGATGCCGC CGCTCGAGGA GCAGTTGCGG CTGCTGCGCA GGCTGTGGCC GGGCCCGCTG
GTGTGCCGCT GGAACCTCAA CCCCGTGCAT GGCGCCTACG GCTACGAAGA GGCCGAAGCG
CTCTACAGCC CGTTCGACCG CGTCGTGCAT CCCGCGCCGG AGGTGCATGC GCTGCTGGCG
CGCACGCTGG CGGGCATCAC CGGCAGGGGG CAGAACGCGT TCGTCGCGAT CAGCAACCAT
GCGGAGGGCT GCGCGCCGAT CACCATTCGT ACCCTGGCGG GCGAGGTGGC AGCGCTGCAG
GGCCATCGCC CGCCCGCCAG TGCCGCGACA GGTGGCGACC CGGCACCGAA CGCAGACGCA
GACCCGGAAT CCGACGACGG CTCCAAGGCC TGA
 
Protein sequence
MQDSLFGDDL PPPPAPSPAP PGPATESPAA APRRRPRAGG VHPIEPDPGL LALAAALPQQ 
LRLGGSSWSY PGWKGLVWEG EHSESTLARQ GLAAYARHPL MRTVSIDRGF YKPLTVSQYA
GYASQVPDDF RFIVKAPSLV TDALVRAEDG RGRAPNPAFL DPALALQEFV APALEGLGAK
IGALVFQLSP LPLAQLHRLE GTIAQLGALL RAMPPLAPAA PDGVLAVEVR DPEWLSPEYE
PLFAEALLSA GATYCLGLHA KMPPLEEQLR LLRRLWPGPL VCRWNLNPVH GAYGYEEAEA
LYSPFDRVVH PAPEVHALLA RTLAGITGRG QNAFVAISNH AEGCAPITIR TLAGEVAALQ
GHRPPASAAT GGDPAPNADA DPESDDGSKA