Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1869 |
Symbol | |
ID | 4668626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 2026715 |
End bp | 2027887 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639823078 |
Product | hypothetical protein |
Protein accession | YP_970227 |
Protein GI | 120610549 |
COG category | [S] Function unknown |
COG ID | [COG1801] Uncharacterized conserved protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.19198 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAGATT CGCTCTTCGG CGACGACCTT CCGCCGCCTC CTGCGCCCTC TCCCGCACCG CCCGGGCCGG CCACCGAATC TCCCGCCGCC GCGCCACGCC GTCGGCCGCG GGCCGGTGGC GTCCACCCCA TCGAGCCCGA CCCCGGCCTG CTGGCCCTCG CCGCCGCCCT GCCCCAGCAG CTGCGGCTCG GCGGCTCCTC CTGGAGCTAC CCCGGCTGGA AAGGCCTGGT CTGGGAAGGC GAGCACTCCG AATCCACCCT GGCGCGCCAG GGACTGGCCG CGTATGCACG GCACCCGCTG ATGCGCACCG TGAGCATCGA CCGCGGTTTC TACAAGCCTC TCACCGTGAG CCAGTACGCG GGCTACGCCT CGCAGGTGCC CGACGACTTC CGCTTCATCG TGAAGGCGCC AAGCTTGGTG ACCGATGCAC TGGTGCGCGC CGAGGACGGC CGCGGGCGCG CGCCGAACCC GGCCTTCCTC GACCCCGCAC TGGCACTCCA GGAATTCGTG GCGCCCGCGC TGGAAGGCCT GGGGGCCAAG ATCGGAGCGT TGGTGTTCCA GTTGAGCCCC TTGCCGCTGG CGCAGCTCCA TCGCCTCGAA GGCACCATCG CCCAGCTAGG CGCCCTGCTG CGCGCGATGC CGCCGCTCGC CCCCGCCGCA CCGGACGGCG TGCTGGCCGT GGAGGTGCGC GATCCGGAGT GGCTGTCGCC GGAATACGAG CCGCTGTTCG CCGAAGCGCT GCTCTCGGCC GGCGCCACCT ATTGCCTCGG GCTGCATGCC AAGATGCCGC CGCTCGAGGA GCAGTTGCGG CTGCTGCGCA GGCTGTGGCC GGGCCCGCTG GTGTGCCGCT GGAACCTCAA CCCCGTGCAT GGCGCCTACG GCTACGAAGA GGCCGAAGCG CTCTACAGCC CGTTCGACCG CGTCGTGCAT CCCGCGCCGG AGGTGCATGC GCTGCTGGCG CGCACGCTGG CGGGCATCAC CGGCAGGGGG CAGAACGCGT TCGTCGCGAT CAGCAACCAT GCGGAGGGCT GCGCGCCGAT CACCATTCGT ACCCTGGCGG GCGAGGTGGC AGCGCTGCAG GGCCATCGCC CGCCCGCCAG TGCCGCGACA GGTGGCGACC CGGCACCGAA CGCAGACGCA GACCCGGAAT CCGACGACGG CTCCAAGGCC TGA
|
Protein sequence | MQDSLFGDDL PPPPAPSPAP PGPATESPAA APRRRPRAGG VHPIEPDPGL LALAAALPQQ LRLGGSSWSY PGWKGLVWEG EHSESTLARQ GLAAYARHPL MRTVSIDRGF YKPLTVSQYA GYASQVPDDF RFIVKAPSLV TDALVRAEDG RGRAPNPAFL DPALALQEFV APALEGLGAK IGALVFQLSP LPLAQLHRLE GTIAQLGALL RAMPPLAPAA PDGVLAVEVR DPEWLSPEYE PLFAEALLSA GATYCLGLHA KMPPLEEQLR LLRRLWPGPL VCRWNLNPVH GAYGYEEAEA LYSPFDRVVH PAPEVHALLA RTLAGITGRG QNAFVAISNH AEGCAPITIR TLAGEVAALQ GHRPPASAAT GGDPAPNADA DPESDDGSKA
|
| |