| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1830 |
|---|
| Symbol | |
|---|
| ID | 4665096 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 1983662 |
|---|
| End bp | 1985029 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639823032 |
|---|
| Product | peptidase RseP |
|---|
| Protein accession | YP_970188 |
|---|
| Protein GI | 120610510 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
|---|
| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCTCA CCATCGTCGC CTTCATCGTC GCCCTGGGCC TGCTCATCGC GGTCCATGAG
TACGGGCACT ACCGCGTGGC CGTGGCCTGC GGGGTCAAGG TGCTGCGCTT CTCGGTGGGT
TTCGGCAAGC CGCTGCTGCG CTGGCAGCCG CGAGGGTCGT CCACGGAATT CGTCATCGGC
GCCTTCCCGC TGGGCGGCTA CGTGCGCATG CTGGACGAAC GCGAGGCGCC GGTCGATCCC
GCGGAGCGCC ACCTGGCCTT CAACCGGCAG CCGCTGCGCT CGCGCGCGGC GATCGTCGCC
GCCGGCCCGG TCGCGAACCT GCTGCTGGCC ATCGCGCTGT ATGCCGCGGT CAACTGGATC
GGCGTGCAGG AGCCGCGGGC CATCCTCGCG AGTCCCGCGG CGGGTTCGGT GGCCTACGAC
GCGGGCCTGC GCGGCGGCGA ACTGGTCGTG GCCGCCGCCA TGGGGCCGGA CGAGCCGGAG
CCGGTGCGTT CCTTCGAGGA TCTGCGGTGG CTGCTCACGC GCGGTGCGCT GGACGGGCAG
GACGTGCGCC TGCAGGTCGA GCCCGCGTCC GGCGCGCCTC GCCGTGAGCT GGTTCTGGAG
CTGCACGATT TCGATGCGCG GCAGGCGGAC GCGCAGTTGT TCCGCAAGAT CGGCGTGCTG
GGCCCGTGGA CGCGCCCGGT GATCGGCGAG GTGGTGGACG GCGGCGCTGC GCAGCGCGCC
GGGCTGCGGG AGGGCGACAC CGTGCTGCAG GTGGGCGCGA CCCCGGTGGT GGACGGCCAG
CAACTGCGGG ACCTGATCCG GGCCTCGGTG CAGGATGGCA AGTCGGTCTC CCAGGTATGG
CGGGTGGACC GCGGCGGGCG CACCGTGCAG CTGGACGTGG CACCGGACGT GGTGCGCCAG
GACGGGGCTG CGCCCGCCGG GCGGGTGGGC GCCTATGTCG GCGCGCAGCC GGCCATGGTC
ACCGTGCGCC ACGGTCCGCT CGAAGGCCTG TGGAAGGGCG TGACGCGCAC CTGGGAGGTC
TCCGCGCTCA CCCTGCGCAT GATGGGCCGC ATGGTGGTCG GCGAGGCCTC GCTCAAGAAC
CTGAGCGGCC CGCTCACCAT CGCCGACTAC GCGGGCCGGT CCGCCAGCCT GGGATTCACG
CAATACCTGG TGTTCCTGGC CCTCATCAGC GTGAGCCTGG GGGTGCTGAA CCTGCTGCCG
CTGCCGGTCC TCGATGGGGG GCACCTGATG TATTATCTTT GGGAAGGCGT CACCGGCAGG
GGCGTGTCAG ATGCCTGGAT GGAGCGGTTG CAGAGGGGCG GCGTTGCATT GCTCCTCGTG
ATGATGTCCA TCGCCCTTTT CAACGACGTC ACCCGGCTTT TTGGCTAA
|
|---|
| Protein sequence | MLLTIVAFIV ALGLLIAVHE YGHYRVAVAC GVKVLRFSVG FGKPLLRWQP RGSSTEFVIG
AFPLGGYVRM LDEREAPVDP AERHLAFNRQ PLRSRAAIVA AGPVANLLLA IALYAAVNWI
GVQEPRAILA SPAAGSVAYD AGLRGGELVV AAAMGPDEPE PVRSFEDLRW LLTRGALDGQ
DVRLQVEPAS GAPRRELVLE LHDFDARQAD AQLFRKIGVL GPWTRPVIGE VVDGGAAQRA
GLREGDTVLQ VGATPVVDGQ QLRDLIRASV QDGKSVSQVW RVDRGGRTVQ LDVAPDVVRQ
DGAAPAGRVG AYVGAQPAMV TVRHGPLEGL WKGVTRTWEV SALTLRMMGR MVVGEASLKN
LSGPLTIADY AGRSASLGFT QYLVFLALIS VSLGVLNLLP LPVLDGGHLM YYLWEGVTGR
GVSDAWMERL QRGGVALLLV MMSIALFNDV TRLFG
|
|---|
| |