| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1750 |
|---|
| Symbol | |
|---|
| ID | 4669897 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 1912430 |
|---|
| End bp | 1913122 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639822953 |
|---|
| Product | putative prophage repressor |
|---|
| Protein accession | YP_970111 |
|---|
| Protein GI | 120610433 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.141014 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAATCCT TTGACACCAT CACGCCCGTG AAAACCATTG CAGAACGCCT GAGAGCCGCA
AGAGAACGGG CTGGCCTCAC CCAGCCGGCC CTGGCCCAGC GCGCGAACGT CTCCCAAGGG
ACGATCGGGA ACATCGAATC GGGGCTGCGC AAGCGCCCCC GCGACTTACT TGCTATCGCT
GCCGCGCTGC ATGTGTCCCC GTTGTGGCTT GAGACCGGAC AAGGCCTTAT GCACGGTGAC
CACGATCAGG CCAACGTTTC GACCGCCCCT GCGTCGATGA GGCCGCGCCG CTACCCGGTT
ATTTCTTCAG TGCAGGCGGG CGAATGGGAG GAGATCGTGG ACCAGTTCTC ACCCGGGGAT
GCGGAGGATT GGCAGGACAG TCCTGTGGAT CTCGGGCCGA ACGGGTTTGT GCTGAAGCTG
GAGGGCAGTT CAATGACCAA CCCCGCAGGT GGTAGAGACA ATTTCCCCGA GGGTATGTAT
GTGCACATCC ACCCAGGAGT TGAAGCTCAA CCTGGCGACT ATGTGGTGGC GAAGCGCGAA
GCGGACAACA AGGCGACCTT CAAAAAGCTG GTGCGCGTTG ATGGTGAGCA GTTTCTTCAC
GCCATTAATC CAGCGTGGCC GAAGCCCTAT ATAAAGCTTG AGCCGGGCGA CAGAATTATA
GGGAAATTAA AGTTTGCTGG ATGGAGTTTT TAA
|
|---|
| Protein sequence | MQSFDTITPV KTIAERLRAA RERAGLTQPA LAQRANVSQG TIGNIESGLR KRPRDLLAIA
AALHVSPLWL ETGQGLMHGD HDQANVSTAP ASMRPRRYPV ISSVQAGEWE EIVDQFSPGD
AEDWQDSPVD LGPNGFVLKL EGSSMTNPAG GRDNFPEGMY VHIHPGVEAQ PGDYVVAKRE
ADNKATFKKL VRVDGEQFLH AINPAWPKPY IKLEPGDRII GKLKFAGWSF
|
|---|
| |