Gene Aave_1560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1560 
Symbol 
ID4666757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1726671 
End bp1727699 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content72% 
IMG OID639822762 
Producthypothetical protein 
Protein accessionYP_969923 
Protein GI120610245 
COG category[S] Function unknown 
COG ID[COG3597] Uncharacterized protein/domain associated with GTPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCTG AACAGACCCG CGCCGTCATG ACCCTGGCCC TGATGGCCGC CTTCGCCGAC 
GACCACAAGG ACGAGCGCGA GCGGGAGCAT ATCCGCGAGC TGGCCCAATC CCTGGGCGCC
GCCAGCGGTG CCGACCTGAT GAAGACCTAC CAGGATGTCT TGCTCGGCCG TGCGCGCCTG
GAAGACGCCG TGGCCGCGCT CGAGACGCCC GCGCAGCGCC TGCTGGCCTT CGAGATGGCC
GTGGGCGTGT GCGATGCCGA CGGCGTCTGC AATGCCCAGG AAAAAGCGTT CCTGGAGCGG
CTGCGCGCGG CCCTGGCCAT CGCCCCGTCC GATGCCGGCG CCGTCACCGA GCAGGCCGAC
GCCCTGGCCG GCGCTCCTGT ACGGGCCGCG CCCGTGGAGG GCGAGGACGT GCCCCCGGCC
GCGCTCGCCG TCGCCGCGGC GCCCGTGGCT TCCGGCGCGG CGGCGGCATC CGCGCAAGGC
GGAGCGGGCA CCCCCGGCCT GCGTGCGGCC TCGGTGAGCG ATGCGGAGAT CGATTCCATG
GTGCTCAACG CCGCCATCCT GAACGGCGCG CTGGAACTGC TGCCGCAATC CCTCGCTTCC
ATGGCCATCA TCCCGCTGCA GACGCGGCTG GTCTATCGCA TCGGCAAGGT CCATGGCTAC
GAGCTCGACA AGGGCCACAT CACCGATTTC CTGGCCACCG TGGGCGTGGG CCTCACCTCG
CAGTATGTCG AGCAGTTCGG CCGCAAGCTG GTGGGCGGCC TGCTGGGCAA GGTGATGGGC
GGCCTGGGCC GCGCCGTGGG CAGCGCCGCC ACCGGCTCCG CGTTCTCCTT CGCCACCACC
TACGCCCTGG GCAAGGTCGC ACAGCGCTAC TACGCCGGTG GCCGCACCCT GGGCACCGAC
GCGCTCAAGT CCGCCTTCGC CCGCACGGCC GAAGAGGCCC AGGGCCTGCA GCAACGCTAC
GCGCCCCAGA TCCAGGAGCG CGCCCGCGGC CTGGACGTGG GCAAGCTGCT GAAGGAACTG
CGGGCCTGA
 
Protein sequence
MQPEQTRAVM TLALMAAFAD DHKDEREREH IRELAQSLGA ASGADLMKTY QDVLLGRARL 
EDAVAALETP AQRLLAFEMA VGVCDADGVC NAQEKAFLER LRAALAIAPS DAGAVTEQAD
ALAGAPVRAA PVEGEDVPPA ALAVAAAPVA SGAAAASAQG GAGTPGLRAA SVSDAEIDSM
VLNAAILNGA LELLPQSLAS MAIIPLQTRL VYRIGKVHGY ELDKGHITDF LATVGVGLTS
QYVEQFGRKL VGGLLGKVMG GLGRAVGSAA TGSAFSFATT YALGKVAQRY YAGGRTLGTD
ALKSAFARTA EEAQGLQQRY APQIQERARG LDVGKLLKEL RA