Gene Aave_1549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1549 
Symbol 
ID4668423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1716194 
End bp1716991 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content71% 
IMG OID639822751 
Producthypothetical protein 
Protein accessionYP_969912 
Protein GI120610234 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.237876 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTACCA TCACCGTAAG CCGCTACGTC ACGCCGCTGC GCGAGGGCGG CTCCATGCCG 
GCCGTCGTGG AGGGCGACGA CCTCGGCGTC TATGTCCTCA AGTTCCGCGG TGCCGGGCAG
GGCGTGCGTG CGCTCATGGC CGAGATCATC GCCGGCGGCA TCGCCCGTGC GCTGGAACTG
CCCGTGCCCG AAATCGTGCT GGCCCAGCTC GATCCGGCAC TCGCGCAGAC CGAGCCGGAC
CCCGAGATCC AGGACCTGAT CCGCGCGAGC GCGGGGCTGA ACGTGGCGCT CGACTATCTC
TCCGGCGCGG TCAACTTCGA TCCGGCGGTG GACCGCGTCA CGCCCGATTT CGCGTCGCGC
CTCGTCTGGT TCGACGCGCT GGTGGGCAAC GTGGACCGCA CCGCGCGCAA CACCAACCTG
CTGGTGTGGC ACCGCGACCC GTGGCTGATC GACCATGGCG CGTCGCTCAC CTTCCACCAC
GCCTGGAACG GCACGGTGGC GCAGCCCGCC AAACCGTTCG CGCCGATCGC CGACCATGTG
CTGCTGCCCC TGGCCACGGA ACTGGCGGCG GTGGATGCCG GGCTGGCTGC GCGCCTCACT
CCAGAATGCC TGCAGGCGGT GCTGGCCGAG GTGCCCGACC TGTTCCTGGC ACAGGCGGCC
GAGGGCCATG GGGACGGGGA GGGCGATGGT CCGCTCGCCG ATCCGGCGGC GCACCGGCAG
GCCTACGTCG ATTATTTCCT GGCGCGGCTC GCGGGCCGGC AAGCCTGGCT GCAGGGGGCG
ATCGATGCAC GCGGCTGA
 
Protein sequence
MRTITVSRYV TPLREGGSMP AVVEGDDLGV YVLKFRGAGQ GVRALMAEII AGGIARALEL 
PVPEIVLAQL DPALAQTEPD PEIQDLIRAS AGLNVALDYL SGAVNFDPAV DRVTPDFASR
LVWFDALVGN VDRTARNTNL LVWHRDPWLI DHGASLTFHH AWNGTVAQPA KPFAPIADHV
LLPLATELAA VDAGLAARLT PECLQAVLAE VPDLFLAQAA EGHGDGEGDG PLADPAAHRQ
AYVDYFLARL AGRQAWLQGA IDARG