Gene Aave_1461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1461 
Symbol 
ID4665236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1610979 
End bp1614182 
Gene Length3204 bp 
Protein Length1067 aa 
Translation table11 
GC content68% 
IMG OID639822664 
Productacriflavin resistance protein 
Protein accessionYP_969826 
Protein GI120610148 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.680288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACG CGACGCAGCA GCCGCCCACC GGCGGATTCA ACCTGTCCAA ATGGGCGCTG 
GACCACCCCG CCCTCACGCG CTACCTCATG GTGGTGCTCA TGCTGCTGGG CGTGGGCGCC
TACTTCCAGC TCGGCCAGGA CGAGGACCCG CCCTTCACCT TCCGCGCCAT GGTGGTGCGC
ACCTATTGGC CCGGCGCCAC CGCGCAGCAG GTGGCGGAAC AGGTCACCGA CAAGCTCGAA
CGCACCCTGC AGGAAGTGCC GTACGCAGAC CGCATGCGCA GCTACTCCAA GCCGGGCGAG
TCGCAGATCA TCTTCGAGCT CAAGGATTCA TCGCCGCCCG GCGAGGTGCC CGGCGTCTGG
TACACGGTGC GCAAGAAGAT CGGCGACATG CGCGCCACCC TGCCCCAGGG CGTGCAGGGC
CCGTTCTTCA ACGACGAATT CGGCGACGTC TACGGCGTGA TCTATGCCAT CGAAGCGGAA
GGCTTCAGCC CGGCCGAGCT CAAGACCTTC GCAGACGACA TCCGCCAGCA GTTGCTGCGC
GTGAAGGACG TGGCCAAGGT CGAGCAGTTC GGCATCCAGG ACGAGAAGAT CTACATCGAG
ATCTCGCAGA AGCGCCTCGC CCAGCTCGGC CTGGACATGA ACCAGATCCT GAACCAGCTC
GGCCAGCAGA ACGCCGTCGA GAGCGCGGGC ACCGTCCAGA CCCCGCAGGA CCAGGTGCAG
ATCCGCGTGG CCGGACAGTT CGGCGCCGTC GAGGAACTGC GCGCGATGCC GATCCGGGGC
GCCTCCGGCG CACAACTGCG GCTGGGCGAT ATCGCCGAGG TCCGCCGTGG CTACATCGAC
CCGCCCTCCA TCAAGGTGCG CCACCAGGGC CGGGAAGTCG TCGCGCTCGG CGTGTCGATG
GCCAAGGGCG GCGACATCAT CCGCCTGGGC GAAGCACTGC ACGCGGCCGC GCGCCGCATC
GAGCAGACCC TGCCGGCCGG CGTGCGCCTC GTGAATGTGC AGGACCAGCC CCGCGCCGTG
TCGTCGTCCG TGAACGAGTT CGTCAAGGTG CTCATCGAGG CCGTCGTGAT CGTGCTCGCC
GTGAGCTTCC TGAGCCTCGG CCTGCACAAG CGCCCCGGCA GCCATCCGCT GTGGCGCCGC
TGGACGCTGG ACATCCGCCC CGGCCTGGTG GTGGGCATCA CGATCCCGCT GGTGCTGGCC
GTGACCTTCC TGGCCATGTG GTACTGGAAG ATCGGGCTGC ACAAGATCTC CCTCGGTTCG
CTCATCATCG CCCTCGGGCT GCTGGTGGAC GATGCCATCA TCGCCGTCGA GATGATGGTC
CGGAAGATGG AAGAAGGCTA CGACAAGGTC CGCGCCGCCA CCTTCGCCTA CGAGATCACG
GCCATGCCGA TGCTCACCGG CACCCTGATC ACCGCGGCGG GCTTCCTGCC CATCGGCATC
GCCAAGTCGG TCACCGGCGA GTACACCTTC GCGATCTTCG CGGTCACCGT GATCGCGCTC
GTACTGTCGT GGTTCGTCTC GGTGTACTTC GTGCCGTACC TGGGCACGCT GCTGCTCAGG
GTGCCCGAGC ACCCGAAGGC GCAAGACCAT CCGTCCGGAA CCGCCCAGGG GGCGGCACAA
GGGCCGCACG AGGTCTTCGA CAGCCCTTTC TACAACACCT TCCGCCGCGC CGTGGATGCA
TGCGTGGAGC ACCGCTGGAT CACCATCGGC GTCACGCTGC TGCTCTTCGC GCTGGGCATC
ATGGGCATGG GGCGCGTCCA GCAGCAATTC TTCCCCGACT CCAGCCGCCC GGAAATCCTG
ATCGACGCAT GGTTCCCCGA GGGCACCTCG TTCGCCGCGA ACGAGGCCGT GCTCAAGCGC
ATGGAAAAAC GCCTCGTCGA GGAGCCCGGC GTGCACTCGG TCAGCACCTG GATCGGCTCG
GGCGTGCCGC GTTTCTACCT GCCGCTGGAC CAGGTATTCC CGCAATCCAA CGTATCGCAG
ATCATCCTGC TGCCCCAGGA CCTGGCACGG CGCGAAGCGC TGCGGCACGC GCTGCCGGCG
ATGCTGGCGC AGGAATTTCC CGAAGTGCGG GCCCGCGTCA AGCTGCTGCC CAACGGTCCG
CCCGTGGCGT ATCCGGTGCA GTTCCGCGTG ATCGGCAACG ATCCGGCGCG GCTGCGCCAG
CATGCGGACG AGGTGCGCAA GATCCTGCGC GAACACCCGC AGATGCTCGG CGTGAATGAC
AACTGGAACG AATCCGTGAA GACCATGCGC CTGGAGATCG ACCAGGACAA GGCGCGCGCG
CTCGGCGTCA CCAGCCAGTC CATCGCCCAG GCCGCTCGCA CCGTGTTCAC CGGCACCACC
GTCGGCCAGT ACCGGGAGGG CGACCGCCTG ATCGACATCG TGTTCCGGCA GCCGCCGGAC
GAGCGGCAGG CCATCACGGA CATCGCGAAC GCCTACCTTC CCACCGCATC GGGCAAGGCC
ATTCCCCTGA CCCAGATCGC GCGCCCCGTG TTCGCCTGGG AGCCGGGCGT CATGTGGCGG
CAGAACCGCG AGTACGCCAT CACGGTGCAA GGCGACGTGA TCGAAGGACT CCAGGGCGCT
ACCGTCACCG AGGCGCTGCT GCCCGGCCTG CGCCAGCTGG AAGCCCAATG GCATGCATCG
GGAGACGCCG GCTACCGGAT CGAGGTCGCC GGCTCCGTGG AGGAAAGCTC CAAGGGCTCC
GCCTCCATCG CGGCGGGCGT GCCCATCATG CTGTTCATCA CCTTCACGCT GCTCATGCTC
CAGCTGCACA GCTTCAGCCG CGCCCTGCTG GTGTTCCTCA CCGGCCCGCT CGGCATCGCC
GGGGTGGCGG GCGCCTTGCT GCTGCTCGGC CGGCCCTTCG GGTTCGTGGC ACTGCTGGGC
GTGATCGCGC TCATGGGCAT GATCCAGCGC AACTCCGTCA TCCTCATCGA CCAGATCGAG
AGCGACCGCG CACGCGGCGT GCCGGCGTGG GACGCCATCG TGGAATCCGC GGTGCGCCGG
CTGCGCCCGA TCGTGCTCAC CGCTGCCGCT GCCGTGCTGG CGATGATTCC CCTGTCGCGC
AGTGTCTTCT GGGGGCCGAT GGCTGTCGCC ATCATGGGCG GGCTCATCGT CGCGACGGTG
CTCACGCTGC TGGCGCTGCC TGCGATGTAC GCCGCGTGGT TCCGCGTGAG GCGGCCCGAA
ACGCGGCCAC CACGACCGGC CTGA
 
Protein sequence
MENATQQPPT GGFNLSKWAL DHPALTRYLM VVLMLLGVGA YFQLGQDEDP PFTFRAMVVR 
TYWPGATAQQ VAEQVTDKLE RTLQEVPYAD RMRSYSKPGE SQIIFELKDS SPPGEVPGVW
YTVRKKIGDM RATLPQGVQG PFFNDEFGDV YGVIYAIEAE GFSPAELKTF ADDIRQQLLR
VKDVAKVEQF GIQDEKIYIE ISQKRLAQLG LDMNQILNQL GQQNAVESAG TVQTPQDQVQ
IRVAGQFGAV EELRAMPIRG ASGAQLRLGD IAEVRRGYID PPSIKVRHQG REVVALGVSM
AKGGDIIRLG EALHAAARRI EQTLPAGVRL VNVQDQPRAV SSSVNEFVKV LIEAVVIVLA
VSFLSLGLHK RPGSHPLWRR WTLDIRPGLV VGITIPLVLA VTFLAMWYWK IGLHKISLGS
LIIALGLLVD DAIIAVEMMV RKMEEGYDKV RAATFAYEIT AMPMLTGTLI TAAGFLPIGI
AKSVTGEYTF AIFAVTVIAL VLSWFVSVYF VPYLGTLLLR VPEHPKAQDH PSGTAQGAAQ
GPHEVFDSPF YNTFRRAVDA CVEHRWITIG VTLLLFALGI MGMGRVQQQF FPDSSRPEIL
IDAWFPEGTS FAANEAVLKR MEKRLVEEPG VHSVSTWIGS GVPRFYLPLD QVFPQSNVSQ
IILLPQDLAR REALRHALPA MLAQEFPEVR ARVKLLPNGP PVAYPVQFRV IGNDPARLRQ
HADEVRKILR EHPQMLGVND NWNESVKTMR LEIDQDKARA LGVTSQSIAQ AARTVFTGTT
VGQYREGDRL IDIVFRQPPD ERQAITDIAN AYLPTASGKA IPLTQIARPV FAWEPGVMWR
QNREYAITVQ GDVIEGLQGA TVTEALLPGL RQLEAQWHAS GDAGYRIEVA GSVEESSKGS
ASIAAGVPIM LFITFTLLML QLHSFSRALL VFLTGPLGIA GVAGALLLLG RPFGFVALLG
VIALMGMIQR NSVILIDQIE SDRARGVPAW DAIVESAVRR LRPIVLTAAA AVLAMIPLSR
SVFWGPMAVA IMGGLIVATV LTLLALPAMY AAWFRVRRPE TRPPRPA