| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1405 |
|---|
| Symbol | |
|---|
| ID | 4667594 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 1539495 |
|---|
| End bp | 1541141 |
|---|
| Gene Length | 1647 bp |
|---|
| Protein Length | 548 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639822599 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_969770 |
|---|
| Protein GI | 120610092 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAA AAACCACCTT CTTCGGCAAC CTGCGGATCG GCTACCGCAT CGGCCTGGCC
TTCCTCGCGG TGATCGCGGT ACTGGCGCTG CTGGCCGCCC TGTCGCTCGG CGCGCTGGGC
AACGTGAACC AGGCCCTCAC CAAGGTCACG CGCGACGCCT ATCCGAAGGT CAAGCTGCTT
TCGCAGATCA CCAACGAAGC GGATGCCCAG GCCCGGTACA CGCGCAACAT GCTGATCTTC
GACAACCCGG ACATCCGCGC GCAGGAAACC CGCCGCATCC AGGAGAGCCG GGAGACCGTC
ACCGCCCTGT TCTCGCAACT GTCGCAACTG GTCCGCTCCT CCACGGGCGT CGAGATGCTG
GAGGCCTGCC AGACCACGCG CGCAAACTAC ATGCGCGAAC TGGACCGGCT GCTGCAACTC
ATGCGCGACA ACCATTCCGA GCAAGCCCGG GATCTGCTGG AAACCAGCCT GCGCCCCGCC
CAGCAGAAAT TCCTGGAAGC CGTCACCCGC CTGTCCGAGC ACCAGCAGAA GGTCATGGCC
GAAGACAGCG ACCGGGCGGA CGCGCAGGTG AGCACGGGCC GCGTCACCGT GATCGCGATC
GGCGCGCTGG CCGCCGTGCT GGCCATGGCG CTGTGCTGGC TTATCGCCCG CTCCATCACC
CGCCCGCTGC ACACCGCCGT GCAGGTGGCC GAGGCCGTGG CCGGCGGCGA CCTGACGTCG
CACATCCCCA CGGGACGGCG CGACGAGGTG GGCCAGTTGC TCTCGGCCCT GGCGCGCATG
AACGACAGCC TGGTGCGCAT CGTGGGCAGC GTGCGCGCGG GCTCCGACTC CATCGCCACC
GGCACCGTGC AGATCGCCAA CGGCAATGCC GACCTGAGCC AGCGCACGGA AGAACAGGCC
AGCAACCTGG AAGAAACCGC CGCCTCGATG GAGGAACTGA CCTCCACCGT GGAGCAGAAC
GCCGCATCGG CCCGCCGGGC CCACCAACTG GTATCGGGCG CCTCGTCCGT CGCGGCCCAG
GGCGGCGCGG TGGTGCAGGA CGTGGTGCGC ACGATGGACT CGATCCGCCA GGGCTCGGAC
CGCATGGCCG ACATCATCGG CACCATCAAC GGCATCGCCT TCCAGACCAA CATCCTGGCG
CTCAACGCCG CGGTGGAAGC CGCCCGCGCG GGCGAACAGG GCCGTGGCTT CGCCGTGGTG
GCGACCGAGG TGCGCAGCCT CGCGCAACGC AGCGCACAGG CCGCCGCGGA GATCAAGGGC
CTGATCCAAA ACAGCGTGTC GCGCGTGAAC GCCGGCAGCG AACTCGTGGC CCAGGCCGGC
CGCACGATGG AAGACATCGT GACCCAGGTG GCCGAGGTGT CCACCCTGGT CGCGGAAATC
AGCGCCGCCA GCGCGGAGCA ATCCAGCGGC ATCGGCCAGG TGGGCGACGC CGTGCAGCAG
CTGGACCAGG TCACGCAGCA GAACGCCGCG CTGGTGGAAG AAAGCGCCGC GGCCGCCGAC
AGCCTGAAGT TCCAGGCGGA AACGCTGGCG CGCACCGTGG CGCAGTTCCG GCTGCCGCCG
GGTGCGGACG GGGCGGGCGC CACGGCAGCC CCGGCACGGC GCGACCCTGC GGGCGGCACG
GGCGGGCTGC TGCTGGCAGC GGCCTGA
|
|---|
| Protein sequence | MSEKTTFFGN LRIGYRIGLA FLAVIAVLAL LAALSLGALG NVNQALTKVT RDAYPKVKLL
SQITNEADAQ ARYTRNMLIF DNPDIRAQET RRIQESRETV TALFSQLSQL VRSSTGVEML
EACQTTRANY MRELDRLLQL MRDNHSEQAR DLLETSLRPA QQKFLEAVTR LSEHQQKVMA
EDSDRADAQV STGRVTVIAI GALAAVLAMA LCWLIARSIT RPLHTAVQVA EAVAGGDLTS
HIPTGRRDEV GQLLSALARM NDSLVRIVGS VRAGSDSIAT GTVQIANGNA DLSQRTEEQA
SNLEETAASM EELTSTVEQN AASARRAHQL VSGASSVAAQ GGAVVQDVVR TMDSIRQGSD
RMADIIGTIN GIAFQTNILA LNAAVEAARA GEQGRGFAVV ATEVRSLAQR SAQAAAEIKG
LIQNSVSRVN AGSELVAQAG RTMEDIVTQV AEVSTLVAEI SAASAEQSSG IGQVGDAVQQ
LDQVTQQNAA LVEESAAAAD SLKFQAETLA RTVAQFRLPP GADGAGATAA PARRDPAGGT
GGLLLAAA
|
|---|
| |