Gene Aave_1388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1388 
Symbol 
ID4666323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1521924 
End bp1522259 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content69% 
IMG OID639822582 
Productputative transcriptional regulator 
Protein accessionYP_969753 
Protein GI120610075 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.682529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCCA AGGAAAACGC CGCCATCAAC CAGCTTTTCG AGAAGCTCGA ATGCCGTTAT 
GCGCTGCGCG TGCTCTGGGC CCTGCGCGAC GGCCATCCGC AGACGTTCCG GCTGCTGCAG
GACAGCGTCG GCGGCATCAC GCCCAATACC CTCAACACGC GCATCAAGGA ACTGCGCGAG
GCCGGCCTGC TGGACCACGG CAGCGACGGC TATACGGTCA CGCCCTCGGG CGTGGACCTG
CTCAAGCGTC TGAGCGACGT GCAGGCCTTC GCCACCCGCT GGGTCGCCGC CCGCGCCGCC
AGGGCCGCCG GCACGCCCCC CGCTCCCCGG AGCTGA
 
Protein sequence
MSSKENAAIN QLFEKLECRY ALRVLWALRD GHPQTFRLLQ DSVGGITPNT LNTRIKELRE 
AGLLDHGSDG YTVTPSGVDL LKRLSDVQAF ATRWVAARAA RAAGTPPAPR S