| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1377 |
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| Symbol | |
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| ID | 4665780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 1509383 |
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| End bp | 1511590 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639822571 |
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| Product | phospholipase C |
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| Protein accession | YP_969742 |
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| Protein GI | 120610064 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3511] Phospholipase C |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.46368 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTTG ACCCCTCCAA GCGCAAGTTC CTGCAGGCCG CCGCCGGCAC CACGGCCGGT
GCCGCGGCGC TGGGTTTGTT CCCGCCCAGC ATCCGCCGCG CCCTGGCCAT TCCCGCCAAC
CGGCGCACCG GCACGATCAA GGACGTCGAG CACGTCGTCA TACTCATGCA GGAAAACCGC
TCGTTCGACC ACTACTTCGG CACGCTCGTC GGCGTGCGCG GCTTCGGCGA CCGCTTCACC
ATTCCCCTGC CGGGCGGGCG CAGCGTCTGG CAGCAGGCCG ACCAGAACGG CCAGACCGTA
CTGCCCTACC ACTTGAACCA GGCCGCCGGC AACGCCCAGC GCGTGGACGG CACGCCCCAC
AGCTGGGAGG ATGCGCGCGA CGCCTGGGAC CGCGGCCGCA TGGCCGAATG GCCGCGCTAC
AAGCAGCCAC AGTCCATGGG TTACTACACG CAGGCCGAAG CCTCGTTCCA GTTCGCGCTG
GCCAACGCCT TCACCGTATG CGATGCATAT TTCTGCTCGT TGCACGGGGG CACCAATACC
AACCGCCTCT TCCACTGGAC CGGCACGAAC GGCCCCACGG GGCCGGCCGG CCAGGTGGTG
GTGGACAACG CGTGGGATGC GCTGTATTCC GACACCGACA TCCGCACGGG GGGCTATGAC
TGGATCACCT ATCCCGAGCG GTTGCAGCAG GCCGGCGTGT CGTGGATGGT CTATCAGAAC
ATGCCCGACA ACTTCACCGA CAACCCGCTC GTCGGCTTCC GCCAGTACCG CCAAGCCAAC
CTGGCCTCGG GCAAGCCGGT GTACAGCGAC AGCGACGCGA ACCCCGCCTA CGACCCCGCC
AGGGACCAGG CCGGCAATCC GCTCTACAAA GGCATCGCCA ACACCATGCC CGACGGCGGC
TTCCTCGGCA CCTTCCGCCA GGCCGTGCTC CACGGCAGGC TGCCGCAGGT GTCATGGATC
ATCCCGCCGG CAACCTACTG CGAGCACCCC GGTCCTTCCA GCCCCGTGCA GGGCGGCTGG
TACGTACAGG AAGTGCTGGA CGCGCTCACC GCCAACCCGG AGGTGTGGAG CAAGACGGTG
CTGCTCATCA ACTTCGACGA GAACGACGGC TACTTCGACC ACGTGCCGCC TCCGTGCGCG
CCGTCGCTGG ACGGGCGGGG CGGCACGCTC GGCAAGTCCA CCCTGTCCGC GGGCGAAATG
GCCTACGAGT ACTACACCCA TAAACCCTAT GCCGACACCG GCATGCCCCC GCCCGATGGC
GACTGCTACG GCCCGGGGCC GCGCGTGCCC ATGTGGGTAG TCTCCCCCTG GAGTCGCGGC
GGCTGGGTGA ATTCGCAGAA CTTCGACCAC ACCTCGGTGC TGCGCTTCCT GGAAGCCCGC
TTCGGCGTGA AGGAGCCGCA GATCAGCCCC TACCGCCGCG CCGTCTTCGG CGACCTGACC
AGCGCATTCA ATTTCGCCAC GCCCAACGAT GCGCCCCTGG CCACCCTGGC CGGCCGGCGC
AGCAAGGGCG ATGCCGATGC GCTGTGCGAC GCCCAGGGCG CGCTGCCGCA GATCGCCGTG
CCCTCGCCGC AGGCCCTGCC GCGGCAGGCC ACGGGCACGC GGCCTTCCCG TGCCTTGCCC
TACGAACTGC ACGTGCGCGC GCGGACCCAT GCGGCCGGCG GCACGGTGCA ACTGGGGTTC
TCCAACACCG GCACGGCCGC GGCCGTGTTC CACGTGTATG ACCGGCTGCA CCTCGACCGC
GCCCCCCGGC GCTATATGGT GGAGGCCGGC AAGCAACTGC ACGATCACTG GAGCGCGGGC
GCGGACGGCG GTGCCTACGA CCTCTGGGTG CTGGGCCCCA ACGGCTTCCA CCGCTCCTTC
GCCGGCAACC TGGCCGCGTT GCGCGGGGCC GTGCCCCATC CCGAGGCGGA CGTGTGCTAC
GACATCGCCA ACGGCAACGC CCATCTCGTG CTCATGATCA TGAACCAGGG CAGCGCGAGC
GCGGCCCTGC AGGTGAAGTC CAATGCCTAC CGCGGCGACG GCCCATGGAC CACCACCGTG
GCGCCCGGCC AGTCGCAAGA GCTGCAGTGG GACCTCTCGG GCAGCGCGCA CTGGTACGAC
TTCACGCTCA CCTGCGACGC GCTGCCGGGC TTTGCACGGC GCTTCGCGGG ACGCGTCGAG
ACCGGCCGCG ACGGGTTGAG CGATCCGGCG ATGGGCCTGG CCGGCTGA
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| Protein sequence | MTLDPSKRKF LQAAAGTTAG AAALGLFPPS IRRALAIPAN RRTGTIKDVE HVVILMQENR
SFDHYFGTLV GVRGFGDRFT IPLPGGRSVW QQADQNGQTV LPYHLNQAAG NAQRVDGTPH
SWEDARDAWD RGRMAEWPRY KQPQSMGYYT QAEASFQFAL ANAFTVCDAY FCSLHGGTNT
NRLFHWTGTN GPTGPAGQVV VDNAWDALYS DTDIRTGGYD WITYPERLQQ AGVSWMVYQN
MPDNFTDNPL VGFRQYRQAN LASGKPVYSD SDANPAYDPA RDQAGNPLYK GIANTMPDGG
FLGTFRQAVL HGRLPQVSWI IPPATYCEHP GPSSPVQGGW YVQEVLDALT ANPEVWSKTV
LLINFDENDG YFDHVPPPCA PSLDGRGGTL GKSTLSAGEM AYEYYTHKPY ADTGMPPPDG
DCYGPGPRVP MWVVSPWSRG GWVNSQNFDH TSVLRFLEAR FGVKEPQISP YRRAVFGDLT
SAFNFATPND APLATLAGRR SKGDADALCD AQGALPQIAV PSPQALPRQA TGTRPSRALP
YELHVRARTH AAGGTVQLGF SNTGTAAAVF HVYDRLHLDR APRRYMVEAG KQLHDHWSAG
ADGGAYDLWV LGPNGFHRSF AGNLAALRGA VPHPEADVCY DIANGNAHLV LMIMNQGSAS
AALQVKSNAY RGDGPWTTTV APGQSQELQW DLSGSAHWYD FTLTCDALPG FARRFAGRVE
TGRDGLSDPA MGLAG
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