| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1284 |
|---|
| Symbol | |
|---|
| ID | 4665973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 1409951 |
|---|
| End bp | 1410835 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639822478 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_969649 |
|---|
| Protein GI | 120609971 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.115194 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATCT TCGGTGTCTC CCTGCCGGCC CTGCTGAGCC AGCTCCTGCT GGGGCTGGTC
AACGGCTCGT TCTACGCCAT CCTCAGCCTG GGGCTGGCGG TGATCTTCGG CCTGCTGAAC
GTCATCAACT TCGCGCATGG CGCGCTGTTC ATGCTGGGGG CGCTGCTCAC CTGGATGGCG
GGGTCGTATT TCGGCATCAA CTACTGGGTG ATGCTCGTCG CGGCGCCGCT CGTCGTCGGC
CTTTTCGGCG TGGTGATCGA GCGGCTGCTG CTGCGCTGGA TCTACAAGCT CGACCACCTC
TACGGCCTGC TGCTCACGCT CGGGCTCACG CTGCTCATCG AGGGCGTGTT CCGCTCCATC
TACGGTGTCT CGGGCCTGGG GTACGACACG CCCGAACTGC TGGAAGGCGC CACCAACCTC
GGCTTCATGA TCCTGCCCAA CTACCGCGCC TGGGTGGTGG CGGCGTCCAT CGTGGTCTGC
ATCGGCACCT GGTACGTCAT CGAGAAGACC AAGCTCGGCG CCTACCTGCG CGCCGGCACC
GAGAACCCGC GCCTGGTGGA GGCCTTCGGC ATCAACGTGC CGGTGATGAT CACGCTCACC
TACGCCTTCG GCGCGGCACT GGCCGCGTTC GCGGGCGTGC TGGCCGCCCC CGTGTACCAG
GTCACGCCCC TCATGGGGCA GAACCTCATC ATCGTGGTGT TCGCGGTGGT GGTGATCGGC
GGCATGGGCT CCATCATGGG CTCCATCCTC ACGGGCCTGG GCCTGGGCGT CGTCGAGGGT
TTCACCAAGG TGTTCTATCC CGAGGCATCG TCCACCGTGG TGTTCGTCAT CATGGTGGTG
GTGCTGCTCA TCCGCCCCGC CGGCCTGTTC GGCAAGGAAA AGTGA
|
|---|
| Protein sequence | MEIFGVSLPA LLSQLLLGLV NGSFYAILSL GLAVIFGLLN VINFAHGALF MLGALLTWMA
GSYFGINYWV MLVAAPLVVG LFGVVIERLL LRWIYKLDHL YGLLLTLGLT LLIEGVFRSI
YGVSGLGYDT PELLEGATNL GFMILPNYRA WVVAASIVVC IGTWYVIEKT KLGAYLRAGT
ENPRLVEAFG INVPVMITLT YAFGAALAAF AGVLAAPVYQ VTPLMGQNLI IVVFAVVVIG
GMGSIMGSIL TGLGLGVVEG FTKVFYPEAS STVVFVIMVV VLLIRPAGLF GKEK
|
|---|
| |