| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1265 |
|---|
| Symbol | |
|---|
| ID | 4669087 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 1388813 |
|---|
| End bp | 1389421 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639822459 |
|---|
| Product | NADH (or F420H2) dehydrogenase, subunit C |
|---|
| Protein accession | YP_969630 |
|---|
| Protein GI | 120609952 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
|---|
| TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.231678 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCCA TTGCCATCCG ACCCGAGGCT CTACGGGACG CGGTCGCCGC TGCGCTCGGC
GACAAGGTGC GCGACATCGT GCTCGCGCTC GACGAACTCA CGGTGACCGT CTCGGCCGCC
GACTATCTTG CCGCGATGCA GCTGCTGCGC GACGCGCCCG GCTGCCGGTT CGAGCAGCTC
ATGGACCTCT GCGGCATCGA CTACTCCACC TACGGCGACG TGGGCACGGA AGGCCCGCGC
TATGCGGTCG TGTCGCACCT GCTGTCCGTG AGCCTCAACC AGCGCGTGCG CGTGAAGGTG
TTCTGCCCGG ACGACGACTT TCCCGTGGTG GCGTCGGTGT CCGGCATCTG GAACTCCGCC
AACTGGTACG AGCGCGAAGC CTTCGACCTG TACGGCATCG TGTTCGACGG CCATGACGAC
CTGCGCCGCA TCCTGACCGA CTACGGCTTC ATCGGCCATC CCTTCCGCAA GGATTTCCCG
CTGTCGGGCC ACGTCGAGAT GCGCTACGAC ACCGAGGCGC GCCGCGTGGT GTACGAGCCG
GTGACGATCG AGCCGCGCGA GATCACGCCC CGCATCATCC GCGAAGAAAA GTACGGAGGC
CTGCACTGA
|
|---|
| Protein sequence | MTAIAIRPEA LRDAVAAALG DKVRDIVLAL DELTVTVSAA DYLAAMQLLR DAPGCRFEQL
MDLCGIDYST YGDVGTEGPR YAVVSHLLSV SLNQRVRVKV FCPDDDFPVV ASVSGIWNSA
NWYEREAFDL YGIVFDGHDD LRRILTDYGF IGHPFRKDFP LSGHVEMRYD TEARRVVYEP
VTIEPREITP RIIREEKYGG LH
|
|---|
| |