| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1127 |
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| Symbol | |
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| ID | 4669367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 1235598 |
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| End bp | 1237826 |
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| Gene Length | 2229 bp |
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| Protein Length | 742 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639822323 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_969495 |
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| Protein GI | 120609817 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.799055 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGC CGCCCGCTCC GCCCGCGGTG GCCGGGCGCG GCCGCATGCG TGCCTTCGCC
ACGGTGCACG ACGGGCGCGA GGCGCACTGG CACATGCCCG GTCCGCTGGT GCTGCGGATG
ATCGCCGCTG CCGTGGCCGC CGTGCTGCTG GCGGGAGGAC TGGCCGCGTG GATGGTGGCG
CGCTCCGCCC AGCACGAGGC GCTGCAGCGC CTCATGGAGC GGCAGACCGA CGAAGTCGAA
GCGGTCGCGC TGCTGCTGTC GGGCAAGATC GAGCAGAACC AGCGCGTGCT GGCCACGCTG
GCCGAAAGCA TCCCCGCCCC GCTGCCCGAG GCGCCCGGAG CGCTCGATGC CCTGCTGGGC
CAGGGCCTGC CCGCGGCGCG CTTCTTCGAC GCCCTGCAGA TCGCGCGGCA GGACGGCAGC
CTGGGTCTGT ATTGGCAGAA CGGCCGGCTG CATCCCGGCG CGCAACTCGA TCCTGCCGAG
CGCGACCAGT TGCGGCGCAC GCTGCTGGAA GGCAAGCCGC TCCTGTCCGG CGTGATCGGC
AACGGCCCCG CCGACGGGCG CATCATGTTC AGCCTGCCCT TGCGCACGGC CGGAGACGGC
GGCGGCGTGC AGGGTGCGCT GGGCGCCACG CTGCGGCTGC AGTCGCAGGG GCTGTTGCCG
CCATCGATGG CGCTGCCGGC ACGGGCCGGA TCGAGGCTGG TGGTCTTCGC ACGCGATGGA
ACCATCCTCG CGCATCCCGA CCCGGCCCGC GTGCTCGGGC AGGTGCGGGA CGAGGCCGGG
CTGGCGCAGG TGTACGAGCG GGCGCTGCAG GGCGGACAGG CGGCAGTGGC CGGGCGCGGA
TTCTCGGACG TGGTCGCCGG GCAGGTGGTG AGCGTGGCGG GCGTGCCGCT GCCCCAGTGG
CTGGTGGCGC GCGTGAGCGA TGCGCGCGCC TCGGATCTGG ACCTGCTGGC CGGCGGTGGC
CAGCGTGGAC TGGGGGGCGC CGTGGCCGCC ACGGCCTGCG CGGCGCTGCT GGCGGCCATC
GCCATCGCCG TGCTGGCCCA GCCCCTGGCA CGGCTGTGCC GGCGCGTGGC GCGCGCCCAT
CCCACGGGCA TCGCCGACGA TGCGCCCTGG CCGGCGGGAG CCGGCGAGGT GGACGCTCTC
GCGCAGGTCT GCCGGGCGCT GGTGGACGAT TGCCGCATCG CCCGGCACCG GGCGGGCGTG
TTGCAGGACC AGTTCCAGGC CGTGCTGGAC CATGCCCCCG CCGGCATCGT CATCACCCGC
GCCGGGCAGA TGGTGGTGGT CGGGCTGGAG GCCTGCCGCC TGCTCGGCTA TGAACCGCAT
GAACTGCAGG GGCAGCCCGC GCGGCTGCTC TACGCGAGCG ATGCGGCCTA TGCCGAGCTG
GGGCGGCGTG TGCGTGCCGA GTTCGCCGCG CACGGTGCCT TCGACGGAGA TGTCTGCTTC
GTCCGCAAGG ACGGCGGAGC GGTCTGGGCG CGGGTGCTCG GCCGTGCCGT GCGCGACGGC
GCCGTGGCGG AAGGGGGCGG CACGGTATGG ATGCTGGAGG ACCTGACGGC AGCGCGTGAG
GCGCGGCGCC AGCAGGACTG GCCCGCGGGG CATGATTCCC TCACGCAGCT CGCCAACCGC
GACGCGTTCC AGCAGCGCCT GCACGCCCTG CTCGCGGACC ATGCGAAACG CTCCATGGTG
GTGCGCGCCT CGGTCCGAAA TGGTGCATTG CCTTCGGAGT CCCTGCAGGA GTCCCCCGGG
CGTGCGGAGG CCGTGGCACC ACCTCCTGCA CCGGAATCGG GCGTTTTGCT GTTCCTCGAT
CTCGACCATT TCACGGTGGT GAACGCGATC GCCGGGCACG ACGCGGGCGA CGACGTGCTG
CGCCACGTGG GCCGGCTCAT CGAGACGCAG GTGCGGCATG TGGGGTGGGC CGCCCGGCTG
GGCGGGGACG AGTTCGCGGT GGTGCTGCCC GGCTGCGCCC TGCCGCGTGG CCTGGCGATC
GCCACCCAGC TCTGCGCGGC CGTGCACGCC TGGGAGCCGG CCTATGCCGG CCGCACCTAT
ACGCTGGGCG TGAGCATCGG GCTCGTGCCG CTCGATGGCG GCGCCTACGA CGTGCCCACC
GTGCTGCATG CGGCCGACAT GGCCTGCTAC GAAGCCAAGC GCGCGGGCCG CAACCGCGTC
GAGGTGCGGT GGCTGCGGCC GGGCCGTCCG CACGAGAGCA CGACGGCGGA CGGCGACGTG
CAGGCCTGA
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| Protein sequence | MSAPPAPPAV AGRGRMRAFA TVHDGREAHW HMPGPLVLRM IAAAVAAVLL AGGLAAWMVA
RSAQHEALQR LMERQTDEVE AVALLLSGKI EQNQRVLATL AESIPAPLPE APGALDALLG
QGLPAARFFD ALQIARQDGS LGLYWQNGRL HPGAQLDPAE RDQLRRTLLE GKPLLSGVIG
NGPADGRIMF SLPLRTAGDG GGVQGALGAT LRLQSQGLLP PSMALPARAG SRLVVFARDG
TILAHPDPAR VLGQVRDEAG LAQVYERALQ GGQAAVAGRG FSDVVAGQVV SVAGVPLPQW
LVARVSDARA SDLDLLAGGG QRGLGGAVAA TACAALLAAI AIAVLAQPLA RLCRRVARAH
PTGIADDAPW PAGAGEVDAL AQVCRALVDD CRIARHRAGV LQDQFQAVLD HAPAGIVITR
AGQMVVVGLE ACRLLGYEPH ELQGQPARLL YASDAAYAEL GRRVRAEFAA HGAFDGDVCF
VRKDGGAVWA RVLGRAVRDG AVAEGGGTVW MLEDLTAARE ARRQQDWPAG HDSLTQLANR
DAFQQRLHAL LADHAKRSMV VRASVRNGAL PSESLQESPG RAEAVAPPPA PESGVLLFLD
LDHFTVVNAI AGHDAGDDVL RHVGRLIETQ VRHVGWAARL GGDEFAVVLP GCALPRGLAI
ATQLCAAVHA WEPAYAGRTY TLGVSIGLVP LDGGAYDVPT VLHAADMACY EAKRAGRNRV
EVRWLRPGRP HESTTADGDV QA
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