| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1100 |
|---|
| Symbol | |
|---|
| ID | 4666432 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 1205763 |
|---|
| End bp | 1207598 |
|---|
| Gene Length | 1836 bp |
|---|
| Protein Length | 611 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639822298 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_969470 |
|---|
| Protein GI | 120609792 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.127748 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCAGA CACTGCGCTC CAAGATCCTT TTCATCAGCA CCGCCACGGT CGTGTGCGCG
CTGGCGGTCA CCGGGGCCGC CACGTACACC ATCACCCGGG CGAGCACGTT CGAGACCATC
GAGCAGGACC TGAACGCGAT CGCCGCCGGC AACGCCATGG CGGTGGACCA GTGGGTGGCC
TCCAAGGGCA CCGCCGTGGA GGCGACGGCG GCGGCCATCG AGCACGGCGA CCCGCAGGGC
TACGTGCCGC TGATGGGCAA GGCCAACGGC TTCCCCATCA CCACCGTGGG CTGGGAAGAC
AAGACCTTCT TCTCCACCAC CAAGACCGCC CCGGGCTACG ACCCCACGGC ACGCCCCTGG
TACAAGACCG CGGTGCAGGC CGGCAAGCTG GCCGTCACCA AGCCCTACGG CGACTCGACC
ACCGGCGTGC CCTACGTGGC GTTCGTGGCG CCGATGCTGC GCGCCGGCAA GCTCGAGGGT
GTGCTGAGCG GCGCGGTGCC GCTCGACGGC GTGCGCGAGG TGGTTGCGGC CATCCGCCCC
ACGCCCGGCA GCTTCGGTTT CGTGGTCAAC AGCGACGGGC AGGTCATCGC GCATGCCGAC
GCCAAGCTGG CGCTCAAGCC GGTCACCGAG ATTTCCGCCG TGCTGACGCC GGCCACCATG
GGGTCCATCG CCACGTCGGA CAAGCCGCTC GAGGTCGAGA TGGACGGCGC CGACAAGCTG
CTCAAGGGCC GCCCCGTGCA CGGCACGGAC TGGACGCTCG TGGTGGCGCT GGACAAGGCC
GAGGCCACGG CCGGCCTGCG CAGCGTGCTG CACACCCTGG CCGTCGCGAT CGTGCTGCTG
GCCCTGGCCG CGGCCGGCGT CGCCGCCCTG CTCACCGCCA CCTCCTTCCG CCGCCTCTCG
CAGGTGCGCG ACGCCATGGA CCGCATCGGC TCCGGCGGCG GCGACCTGAC CCAGCGCCTG
CCCGTGTCCG GCCGCGACGA GGTCGCCCAG ATCGCCTCCT CGTTCAATGC CTTCGTCGAA
CAGATCGGCA CGGTGCTCAA GGATGTGCGC CACGGCGTGG AATCGATGAA GACGGCCACG
GACGAGATCC GTGCCGGCAA CCAGGACCTC TCCAACCGCA CCGAGGGCTC GGCGAGCGCG
CTGCAGGAAA CCTCCGCGTC GCTGTCGCAG CTCACCGTCA CCCTGCAGCA GTCGGCCGAA
TCCGCCGCGC AGGCCACGCG CCTGGCGAAC TCGGCGAGCG CCTCCGCCCT CAAGGGCGGC
GAGGTGGTGG CCAGCGCCGT CCACACCATG GACGACATCT CCAAGGCCTC GTCCAAGATC
GGCGAGATCA TCGGCGTGAT CGACTCCATC GCATTCCAGA CCAACATCCT GGCGCTGAAC
GCGGCCGTGG AGGCCGCCCG CGCGGGCGAG CAGGGCCGCG GCTTCGCCGT CGTGGCCGGC
GAGGTGCGCA GCCTGGCGCA GCGCAGCGCG GAGGCCGCCA AGGAAATCAA GTCGCTGATC
GACGCCTCGG GCGCCAGCGT GCTCACCGGA ACCGAGCGTG TGCGCGCGGC CGGCGAGACC
ATGGGCGAGA TCGTGGACGG CATCCAGCGC GTCACGCAGA TCATCGGCGA GATCAACGGC
TCCATGGCCG AGCAGAGCTC GGGCATCGCG CAGATCAACC AGGCCGTGGC CGAGATGGAC
CGCGCCACGC AGCAGAACGC GGCGCTGGTG GAGGAATCCA CCGCCGCCTC CGGCGTGCTC
AACGACCAGG CGCACAACCT GTCGCGCACC GTGGCGGGCT TCACGCTCGA CGAGCGCTCC
GCGCCGGAGT CCCACGCACT GGCCCTGCCG CGCTGA
|
|---|
| Protein sequence | MLQTLRSKIL FISTATVVCA LAVTGAATYT ITRASTFETI EQDLNAIAAG NAMAVDQWVA
SKGTAVEATA AAIEHGDPQG YVPLMGKANG FPITTVGWED KTFFSTTKTA PGYDPTARPW
YKTAVQAGKL AVTKPYGDST TGVPYVAFVA PMLRAGKLEG VLSGAVPLDG VREVVAAIRP
TPGSFGFVVN SDGQVIAHAD AKLALKPVTE ISAVLTPATM GSIATSDKPL EVEMDGADKL
LKGRPVHGTD WTLVVALDKA EATAGLRSVL HTLAVAIVLL ALAAAGVAAL LTATSFRRLS
QVRDAMDRIG SGGGDLTQRL PVSGRDEVAQ IASSFNAFVE QIGTVLKDVR HGVESMKTAT
DEIRAGNQDL SNRTEGSASA LQETSASLSQ LTVTLQQSAE SAAQATRLAN SASASALKGG
EVVASAVHTM DDISKASSKI GEIIGVIDSI AFQTNILALN AAVEAARAGE QGRGFAVVAG
EVRSLAQRSA EAAKEIKSLI DASGASVLTG TERVRAAGET MGEIVDGIQR VTQIIGEING
SMAEQSSGIA QINQAVAEMD RATQQNAALV EESTAASGVL NDQAHNLSRT VAGFTLDERS
APESHALALP R
|
|---|
| |