Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1056 |
Symbol | |
ID | 4669358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 1157655 |
End bp | 1158329 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639822255 |
Product | outer protein O |
Protein accession | YP_969427 |
Protein GI | 120609749 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATACTGA AGGTAGTCAT TCAATCAATG AAATCCTTCA TGATCAATAC TTCCATCAAA ACAACTGGCA ACCATAAAAT CTACTCGTCT TCTACCCAAG AGCCACAACG CCATGCACCG CAAGCAGACG CAGGTTCTGC TTCCAAACTG ATCCATCCTG CATTGCAGGG TCTGCCATCG ATCCCGCACG GGGGGGCAGC CCCACGGCAG GCGCTGGTCA ACTCACCGCT TGCCGAGCAT GCACGGCGCA GCGAGGCTTT CAAGGCACAA CGCCAAGCTA TTGCCATGCA ACCCGGTCCG TCCAACCACC CGCACCTCAT TGCCCTCGAC AAGCTCGAGG CGCGTGGATT CGAGCCGGCA GCCGGGGGGA TAAAAATTCC TCTTACGCCC AATTCGCTTC CCGGTGGTGG CAAGCGAGTC CAGACAGTTG GCACTTCATC GCGGGATGTC CATGTTGTTC CTGCCGGAAT TGCTCCGCAA CTTAGGGAAG CCATACAAGA TAAGCAATTG ATGATTCAGA CGCTGACTCA AGAACTGGCA CAAGCAGAAG AGGAGGGTAA TCCAGCTGAA ATAGCACAGA ACCAGCGACT GTTGGCCCAA GCTCGTCAAG ATTTGGCTGG GTACATGAGG CAAGCCGCTG TATACGGAGA AGAGAGTCGT CGGATTAACC GTTGA
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Protein sequence | MILKVVIQSM KSFMINTSIK TTGNHKIYSS STQEPQRHAP QADAGSASKL IHPALQGLPS IPHGGAAPRQ ALVNSPLAEH ARRSEAFKAQ RQAIAMQPGP SNHPHLIALD KLEARGFEPA AGGIKIPLTP NSLPGGGKRV QTVGTSSRDV HVVPAGIAPQ LREAIQDKQL MIQTLTQELA QAEEEGNPAE IAQNQRLLAQ ARQDLAGYMR QAAVYGEESR RINR
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