Gene Aave_1050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1050 
Symbol 
ID4669585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1153848 
End bp1154234 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content65% 
IMG OID639822249 
Productputative transmembrane protein 
Protein accessionYP_969421 
Protein GI120609743 
COG category[S] Function unknown 
COG ID[COG3671] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCA ACGACATCAC CGACATCGAG ACCGACCAGC GTGCCGATTC CCTGAAGACC 
GTCGGCTGGG TGAGCTACAT CCTGCACCTC ATCGTGGCCG TGGGCGCCGT CATCCCGGGC
GCGCAGCCCG GCGCGGCGCT GCTGATCATC GCCCTCGTCA TCGACCTGGT GAAGAAAACC
GATGCCGAGG GCACGTGGCA GGCCTCGCAC TTTTCCTGGC GCATCCGCAC CGTGATCTGG
GCCGGCGTGC TGTACGTGCT CACGGCGCCG CTGTGGATAT TGATCTTCCC CGGCTGGATC
GCCTGGGGCC TGATCTCCAT CTGGTTCCTC TACCGCATCG TGCGCGGCAT GGTCGCCATG
AACAAGGGCC AGGCCATCGA TGTCTGA
 
Protein sequence
MSRNDITDIE TDQRADSLKT VGWVSYILHL IVAVGAVIPG AQPGAALLII ALVIDLVKKT 
DAEGTWQASH FSWRIRTVIW AGVLYVLTAP LWILIFPGWI AWGLISIWFL YRIVRGMVAM
NKGQAIDV