Gene Aave_0953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0953 
Symbol 
ID4665328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1038975 
End bp1040057 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content55% 
IMG OID639822153 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_969325 
Protein GI120609647 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TTCTTACTGT AGTGGGTGCC CGCCCCCAAT TCATCAAGGC GGCAGCCATA 
TCGCGGGCCA TCTCCCAGCG CCATGTCGAT CGTTTTATAG AAGTCCTAGT CCATACAGGG
CAACACTACG ATGCGAACAT GTCGCAGGTG TTTTTTGATG AACTGCAGAT TCCGGCTCCT
AAATACAACA TGGAAGTGTC AGGTGGGGGA CATGGCGTCA TGACCGGACG CATGTTGGAA
GGAGTCGAGA AGATCATTCA GGAAGAGCGT CCGGATTGGC TGCTCATCTA TGGAGATACC
AACTCCACTC TCGCTGGAGC ACTCGCAGCC GCCAAATTGC ACATTCCCAT CGCGCACGTA
GAGGCCGGGC TCAGGTCTTT CAACATGCGG ATGCCGGAGG AAATCAACCG CATCCTCTCG
GACAGGGTTT CCAGCCTGCT TTTCTGTCCT ACTGCAGCAG CAGTGGAGAA CCTGAGAAGA
GAAGGGCTGG AAAAAGGAGT GCATAATGTC GGCGATGTGA CGTATGACGT CGCCCTGTTC
TACAGGGAGA TTGCGCTGCA GCGCAGCGAA ATATTGAATC GCCTTGGCGT CAAGTCTGGC
GATTACGTTC TCGCCACTTG CCATCGTGCG GAAAATACGG ACGATCCAGG GCGGATGTCT
CAGATATTGG AGGCCCTGGG CAGGATCGTG GAAACTCGCC CGGTCGTTTT GCCCCTGCAC
CCGAGAACCA GAAATGCCAT CCATGGCTAT GGACTGGGCG ACCGTCTGAA CAAAATCATG
GTCACAGATC CGTTGCCATA CCTCGACATC GTCGCGCTGG AGCAATGTGC GCACACCATC
GTCACCGACT CGGGCGGCGT ACAGAAAGAG GCTTTCTTCT ACGGTGTTCC TTGCGTCACC
GTGCGGAGCG AAACGGAGTG GATCGAAACC GTCGATTCCG GGTGGAATAC GATCGCCGGT
GCTGATGCCC GCAAGATACT GGACGCCATG GATGCAGGCC GCCCTGCTGC CTCGAAACCT
GAAGTTTATG GCAAGGGTGA CGCGGCAGAC CGTATTCTGG ACATCATGGG CGCTGATCGA
TGA
 
Protein sequence
MKKILTVVGA RPQFIKAAAI SRAISQRHVD RFIEVLVHTG QHYDANMSQV FFDELQIPAP 
KYNMEVSGGG HGVMTGRMLE GVEKIIQEER PDWLLIYGDT NSTLAGALAA AKLHIPIAHV
EAGLRSFNMR MPEEINRILS DRVSSLLFCP TAAAVENLRR EGLEKGVHNV GDVTYDVALF
YREIALQRSE ILNRLGVKSG DYVLATCHRA ENTDDPGRMS QILEALGRIV ETRPVVLPLH
PRTRNAIHGY GLGDRLNKIM VTDPLPYLDI VALEQCAHTI VTDSGGVQKE AFFYGVPCVT
VRSETEWIET VDSGWNTIAG ADARKILDAM DAGRPAASKP EVYGKGDAAD RILDIMGADR