Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0945 |
Symbol | groEL |
ID | 4665910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 1030380 |
End bp | 1032017 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639822145 |
Product | chaperonin GroEL |
Protein accession | YP_969317 |
Protein GI | 120609639 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0596122 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.469876 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGCAA AAGACGTAGT TTTCGGCGGC GAAGCCCGCG CTCGCATGGT CGAAGGCGTG AACATCCTCG CCAACGCCGT CAAGGTGACG CTGGGCCCGA AGGGCCGCAA CGTGGTGCTC GAGCGCTCCT TCGGCGCCCC CACCGTGACC AAGGACGGCG TGTCCGTGGC CAAGGAAATC GAACTGAAGG ACAAGCTGCA GAACATGGGC GCCCAGCTCG TGAAGGAAGT GGCTTCCAAG ACCAGCGACA ACGCCGGTGA CGGCACGACC ACCGCCACGG TGCTGGCCCA GGCCATCGTG CGCGAAGGCT CCAAGTACGT GGCCGCCGGC CTGAACCCGA TGGACCTCAA GCGCGGCATC GACAAGGCCG TGACGGCCCT GGTCGCCGAG CTGAAGAAGG CTTCCAAGGC CACGACGACC TCCAAGGAAA TCGCCCAGGT GGGTTCGATC TCCGCCAACT CCGACGAATC CATCGGCAAG ATCATTGCCG ACGCCATGGA CAAGGTCGGC AAGGAAGGCG TGATCACCGT GGAAGACGGC AAGAGCCTGG ACAACGAGCT GGATGTCGTG GAAGGCATGC AGTTCGACCG CGGCTACCTG TCGCCCTACT TCATCAACAA CCCCGAAAAG CAGGCCGCCC TGCTGGACAA CCCCTTCGTG CTGCTGTTCG ACAAGAAGAT CAGCAACATC CGTGACCTGC TGCCCACGCT GGAGCAGGTC GCCAAGGCCG GCCGTCCGCT GCTGATCATC GCCGAGGAAG TCGAGGGCGA AGCCCTGGCG ACCCTGGTGG TGAACACCAT CCGCGGCATC CTGAAGGTCG TGGCCGTGAA GGCGCCTGGC TTCGGCGACC GCCGCAAGGC CATGCTGGAA GACATCGCCA TCCTGACGGG CGGCAAGGTG ATCGCCGAGG AAGTGGGCCT GACGCTCGAG AAGGTGACCC TGGCCGACCT GGGCCAGGCC AAGCGCATCG AAGTGGGCAA GGAAAACACC ACCATCATCG ACGGCGCAGG CGCTGCCGCT GACATCGAAG CCCGCGTGAA GCAGATCCGC ATCCAGATCG AGGAAGCCAC CAGCGACTAC GACCGCGAGA AGCTGCAGGA GCGCGTGGCC AAGCTGGCCG GCGGCGTGGC CGTGATCAAG GTCGGCGCTG CCACCGAAGT CGAGATGAAG GAAAAGAAGG CACGCGTGGA AGACGCGCTG CACGCCACCC GCGCTGCCGT GGAAGAAGGC ATCGTGGCCG GCGGTGGCGT GGCCCTGCTG CGCGCCAAGC AGGCTGCTGG CGACATCAAG GGTGACAACC CCGATCAAGA CGCCGGCATC AAGCTGATCC TGAAGGCGAT CGAAGCGCCC CTGCGCGAGA TCGTGGCCAA CGCCGGTGGC GAGCCGTCCG TGGTGGTCAA TGCCGTGCTG AACGGCAAGG GCAACTACGG CTTCAACGCC GCCAACGACA CCTACGGCGA CATGCTCGAA ATGGGCATCC TGGACCCGAC GAAGGTGACC CGCACGGCCC TGCAGAACGC CGCTTCCGTG GCTTCGCTGC TGCTGACGAC CGAAGCCATG GTGGCCGAGG CTCCGAAGGA CGATGCACCG GCTCCCGCGA TGCCCGACAT GGGCGGCATG GGTGGCATGG GCATGTAA
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Protein sequence | MAAKDVVFGG EARARMVEGV NILANAVKVT LGPKGRNVVL ERSFGAPTVT KDGVSVAKEI ELKDKLQNMG AQLVKEVASK TSDNAGDGTT TATVLAQAIV REGSKYVAAG LNPMDLKRGI DKAVTALVAE LKKASKATTT SKEIAQVGSI SANSDESIGK IIADAMDKVG KEGVITVEDG KSLDNELDVV EGMQFDRGYL SPYFINNPEK QAALLDNPFV LLFDKKISNI RDLLPTLEQV AKAGRPLLII AEEVEGEALA TLVVNTIRGI LKVVAVKAPG FGDRRKAMLE DIAILTGGKV IAEEVGLTLE KVTLADLGQA KRIEVGKENT TIIDGAGAAA DIEARVKQIR IQIEEATSDY DREKLQERVA KLAGGVAVIK VGAATEVEMK EKKARVEDAL HATRAAVEEG IVAGGGVALL RAKQAAGDIK GDNPDQDAGI KLILKAIEAP LREIVANAGG EPSVVVNAVL NGKGNYGFNA ANDTYGDMLE MGILDPTKVT RTALQNAASV ASLLLTTEAM VAEAPKDDAP APAMPDMGGM GGMGM
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