Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0866 |
Symbol | |
ID | 4667652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 939424 |
End bp | 940914 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639822065 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_969238 |
Protein GI | 120609560 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.555974 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.133337 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCCC CCGCTGCCAC CATCCTGGTC GTCGATGACG AACCCGACCT GCGCACGCTC TACGAACTCA CGCTGCTGCG CGAGGGCTAC CGCGTGGAGA CGGCGGCGAC CGTCGAAGAG GCCCGCCAGC AGCTCCAGAC CCGGCGTTTC GACGCCGTCA TCACCGACAT GCGCCTGCCG GACGGCTTCG GCATGGAGCT GCTGCAGGAC ATCCGCCAGC AGAAGCGGCG CGAGCGCTGC GTGGTGATGA CCGCCTACGG CTCCGCGGAG AACGCCGTCG AAGCGCTGCG CTCCGGCGCG TTCGACTACC TGACCAAGCC GGTGGACCTC AAGCAGTTCC GCTCCGTGGT CGCCTCGGCC GTACAGGGCA CGGGTGGCGT GCCGCCGCCC CGCTCCGCGC GGCCCGGCCC GCCGGGGGCC GCCGCGGCCG CCAGCCTTTC CGGGCTCGAT CCGCTCGTGG GCGACTCGGA GGCCATGCGC AACGTCAAGC AGCGCATCGC CAAGGTCGCG CGCAGCATGG CTCCCGTGCT GATCCGCGGC GAATCGGGCA CCGGCAAGGA ACTCGTCGCC CGCGCCCTGC ACGGCTGCAG CCAGCGCGCC GACGGCCCGC TGGTGGCCGT GAACTGCGGC GCCATCCCCG AGAACCTGCT GGAGGCGGAA TTCTTCGGCG CGCGCAAGGG TTCCTACACC GGCGCCAGCC AGGACCGGGA CGGCTACTTC CAGGCCGCCC GCGGGGGCAC GCTGTTCCTC GACGAGATCG GCGACCTGCC CCTGTCCATG CAGGCCAAGC TGCTGCGCGC CATCCAGGAG CGCAGCGTGC GCCCGCTGGG GTCCACCCAG GAAGACACCG TGGACGTGCG GATCGTCAGC GCCACCCACC GCGACCTGGC CGCCGACGTG CAGGCGGGCC GCTTCCGGCA GGACCTCTAC TACCGCCTCA ACGTGATCGA GGTCGTGATC CCGCCGCTGC GCGAGCGCCG CGAGGATCTT CCGGCCCTGT GCGCCGCGCT GCTGGACCGC ATCGCCGCGG AAACCGGCCT GCCCGTGCCC GCGCTCACCG GCGAGGCCCT GGCGGACATC GCCCGGCACC CGCTCACCGG CAATGTGCGC GAACTGGAGA ACCTGCTGCA CCGCGCCGTG GCGCTGAGCG ACGGCGGCGA ACTGCACATC GAATGCCCCG CGGATGCCGC TGCCGGCACG CCGCGCGCGC CGGTGGCCGC GGCCCCGGCG CCCGAGGCGT CCGGCGCGCC TGCCGGCACC GCGGACCCGC TGCCCGCGGC CCACGTGCCC CTGCCCAGCG ACCTGCAGGG CTGGCTGGAC CAGCAGGAGC GCGAGATCCT GGTGCGCGCC CTGCGCGAGC ACGGGTTCAA CCGCACGGCC ACCGCCGCCC GCCTGGGCAT CAGCCTGCGG CAGATCCGCT ACCGCATCGA CCGCCTGGCC ATCGCCACGC CGCAGGACGA CGACGCGCCG GACGACCATG CAGCCTCCTG A
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Protein sequence | MNAPAATILV VDDEPDLRTL YELTLLREGY RVETAATVEE ARQQLQTRRF DAVITDMRLP DGFGMELLQD IRQQKRRERC VVMTAYGSAE NAVEALRSGA FDYLTKPVDL KQFRSVVASA VQGTGGVPPP RSARPGPPGA AAAASLSGLD PLVGDSEAMR NVKQRIAKVA RSMAPVLIRG ESGTGKELVA RALHGCSQRA DGPLVAVNCG AIPENLLEAE FFGARKGSYT GASQDRDGYF QAARGGTLFL DEIGDLPLSM QAKLLRAIQE RSVRPLGSTQ EDTVDVRIVS ATHRDLAADV QAGRFRQDLY YRLNVIEVVI PPLRERREDL PALCAALLDR IAAETGLPVP ALTGEALADI ARHPLTGNVR ELENLLHRAV ALSDGGELHI ECPADAAAGT PRAPVAAAPA PEASGAPAGT ADPLPAAHVP LPSDLQGWLD QQEREILVRA LREHGFNRTA TAARLGISLR QIRYRIDRLA IATPQDDDAP DDHAAS
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