Gene Aave_0600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0600 
Symbol 
ID4668651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp656328 
End bp657851 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content72% 
IMG OID639821804 
ProductPMT family 4-amino-4-deoxy-L-arabinose transferase/ glycosyltransferase 
Protein accessionYP_968978 
Protein GI120609300 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATCG CCACCACCGC ACCGTCCAGC ATTTCCTACA GAGTCCTCGC ACTGCTGGCG 
GCGCTCTACG TCCTCGCCTG GTCGCTGCTG CCGCCCCTGC TGAGCTCCTG CCTGCCGCTG
GACGTGGTGG AGAGCCTGTC CTGGGGGCGG GAGTGGGAGT GGGGCTACTA CAAGCATCCG
CCGCTGGCGC CCTGGTTGCT GGAGGTGTCC TACCGCGCGC TCGGCCGCGT CGGACCGTTC
CTGCTGAGCC AGCTGTTCAT CGCGGCCACG CTGTGGCTGG TATGGCTCAC GGGATGCCGC
CTGGTGTCGC GCGAGCGCGC CCTGCTGGGC ACGCTGCTGA CCATGGGGGT GGCCTACTAC
ACCCGGCCGG CGCTGGAGTT CAACCACAAC ATCGCGCAGA TGCCGCTGTG GGCGGCGGCG
GGTTACTGCC TGCTGGCGGC GCTCCAGGAA GGCCGGCTGC GGCACTGGCT GGCGCTGGGG
ATCGTGGCGG GCCTGGGCCT GCTGACCAAG TACTCCGTCG GCCTGCTGCT GACGGCGCTG
GCGCTGTATC TGCTGCTGAC GCCTGCGCGC CGCGTGCTGG CGGGCCCCGG GCCGTGGCTC
GCGCTGGCGG CGATGCTGCT GGTGTTCGCT CCGCACCTGC ACTGGCTGCG GGAATCCGGA
TGGCTGCCCA TGGCCTACGC ACGGGACCGC GCCGCCGCGG AAGGCGCCGG GCTCCTCGCG
TCCCGGCTGG ACGCGCTGTC TTTCCTCGCA ACGCAGGCGC TGAACCATCT GCCCCTGGCG
CTGATCGTGC TGGCGGCGCT GTGGAACACG CGCGGACAGC GGATGGCCGA CGCACGGCCC
ATCGCGTGGC GGCTGCATGC CGGCATGCCG GGCTACCTGC TCGTCCTGGC GCTGGGCCCC
TGCCTGCTGG CCTGCGCCCT GGGCGTCGTG CTGGGGCTGC GGTTGCGGGA CATGTGGGGC
GTACCCATGT GGGTGTATAG CGGCCTGCTC GTGGCGGCGT GGCTACCCGG GGCCTGGCTG
CCGGCCCTGC GGCCGCGGCT GCTGCGCGGA CTGGCCGTGT GGCTGGTGCT GGTTTCCGTG
CTGAGCGGCG CGTTCCTGGC CTATGGCGCG CAGTGGCGCA AGCGTCCGGC GCGCACGGAC
TGGCCGCAGG CCGCGGTGGC GCAGCAAGTG CAGTCGCTCT GGGAAGCGCA GTCGCGCTGC
CCGCTGGATT CCGTGTCGGG CGACTACTGG GCGACCGGCC TGGTGGCGGC ACAGTTGCCT
GGCCGGCCCT CGGTCTTCGT TACCGGAGAC GACCGGTTCT CTCCCTGGAT CACGCTGGAG
CGCCTCCAAT CGAAGGGCAC ACTGTGGATC GGACTGGGCG ACGAACCTGC CGTGCCGGCA
TTGCTCGAAC GGCTGGACGC CGCCCCGGGG ATGCGCGTGC GGCAGGGACA GGTACAGGTG
CACTGGCCGT ACCGGGGCGC CGGAGCGCCG CTCACCATGC ATTGGCGCAC CTACGTGCCC
GACGCATGCG CAAACGCCAC CTGA
 
Protein sequence
MPIATTAPSS ISYRVLALLA ALYVLAWSLL PPLLSSCLPL DVVESLSWGR EWEWGYYKHP 
PLAPWLLEVS YRALGRVGPF LLSQLFIAAT LWLVWLTGCR LVSRERALLG TLLTMGVAYY
TRPALEFNHN IAQMPLWAAA GYCLLAALQE GRLRHWLALG IVAGLGLLTK YSVGLLLTAL
ALYLLLTPAR RVLAGPGPWL ALAAMLLVFA PHLHWLRESG WLPMAYARDR AAAEGAGLLA
SRLDALSFLA TQALNHLPLA LIVLAALWNT RGQRMADARP IAWRLHAGMP GYLLVLALGP
CLLACALGVV LGLRLRDMWG VPMWVYSGLL VAAWLPGAWL PALRPRLLRG LAVWLVLVSV
LSGAFLAYGA QWRKRPARTD WPQAAVAQQV QSLWEAQSRC PLDSVSGDYW ATGLVAAQLP
GRPSVFVTGD DRFSPWITLE RLQSKGTLWI GLGDEPAVPA LLERLDAAPG MRVRQGQVQV
HWPYRGAGAP LTMHWRTYVP DACANAT