Gene Aave_0502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0502 
Symbol 
ID4667014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp545993 
End bp548929 
Gene Length2937 bp 
Protein Length978 aa 
Translation table11 
GC content70% 
IMG OID639821708 
Producthypothetical protein 
Protein accessionYP_968882 
Protein GI120609204 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3451] Type IV secretory pathway, VirB4 components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.147471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGGC ATCCGCACTG GCGCTGGTCC GAGCGCGCGG CAGGTGCGCT GCACCGGCTG 
CGCAGCGGTG TCGCCGCGAT GGGCTCCGCC GCTCCGGACC ATCCGGGCGC GGAACCGCCG
GATGCGTGGG ACACGCACAT CGCCCGGCTC GCCGAGAACG GCATTCCACC GCCGGGCGCC
CACGTCCGCC CGTCCGGCGC GCCGCCCGCC ACCGAAGACG ACGAGCGCGC CCTCTACGGC
GTGTCGCCCT CGTTTGTGGA CATGCTGCCC TGGGCCGAAT ACCTGCCGGA GTCGCGGTGC
ATGCTGCTGG ACGACGGCGT GTCCGTCGCG GCGTTCTTCG AGCTCGTGCC CATCGGCACC
GAAGGCCGCG AGATGGCGTG GCTGTGGCAG GCCCGCGATG CGCTGGAGAA CGCGCTGCAG
GACGCTTTCG ACGAGTTGGA CGACCACCCC TGGGTGGTGC AGCTTTATGC CCAGGACGAG
GCCAGTTGGG ACCGCTACCT GCGCGGCCTG GACGCCTACG TGCAGCCGCG CGCGCGGGAC
ACCGCCTTCA CCACTTTCTA CCAACGCTTC TTCGCCCACC ACCTGCGCGC CATCGCCAAG
CCCGGCGGCC TGTTCGAGGA CACCGCCGTG ACGCGCCTGC CCTGGCGCGG CCAGGCCCGC
CGCGTGCGGA TGGTGGTCTA CCGGCGCCTC GGCGATGCCG CCAGCCAGCG CCGCGGCCTG
TCGCCCGAAC AGGCGCTCGC CACTATCTGC GACCGCCTGC AGGGCGGCCT GGCCAACGCG
GGCGTGAGGG CGGAACGCCT GGGCGCCGCC GATATTCATG CCTGGCTCCT GCGCTGGTTC
AATCCCCAGC CGCGGCTGCT CGGCGATACC GCGCTGGACC GGGAACGCTT CTACGACCTG
ACGCGCTATC CCGACGAAGC GGAGGAAGGC GACATCGAAC TCGCGAGCGG CACCGACTTC
ACGCAGCGCC TGTTCTTCGG CCCACCGCGC TCCGACGTGG ACAACGGCCT CTGGTGGTTC
GACGGCATGC CCCACCGTGC GGTGGTGATG GACCGCCTGC GCAACGCGCC GGGCACGGGT
CACCTCACGG GCGAGACGCG CAAGGGCGAC GCGATCAACG CGCTTTTCGA TCAGGTACCC
GAGGACACCG TGATGTGCCT CACCCTGGTC GCCACGCCGC AGGACGTGCT CGAATCCCAC
TTGAACCACC TCGCGCGCAA GGCCGTGGGT GAGACGCTGG CCTCCGAGCA GACGCGCCGC
GACGTGCAGG AGGCGCGTGG CCTCATCGGC AGCGCGCACA AGCTCTACCG GGGCGCTCTC
GCCTTCTACC TGCGCGGGCA GGATCTCGCG CAGCTGGACG AACGCGGCGT GCAGCTTGCC
AACGTGATGC TGGGCGCCGG CCTTCAGCCG GTGCGCGAGG ACGACGAGGT CGCCCCCCTC
AACACCTACC TGCGATGGCT GCCCTGCGTG TTCGACGCGG CGAAGGACAC ACGGCAGTGG
TACACGCAAC TGATGTTCGT GCAGCACGCG GCCAACCTCG CGCCCGTCTG GGGGCGCAGC
CGCGGCACGG GGCACCCCGG CATCACGCTG TTCAACCGCG GCGGCGACAC CATCACCTTC
GATCCGCTCA ACCGGCTGGA CCGGCAGATG AACGCCCATC TGTTCCTGTT CGGGCCCACG
GGGTCGGGCA AGAGCGCCAC CCTCAACAAC CTGCTCAACC AGGTGACGGC GATGTACCGC
CCTCGCCTCT TCATCGTCGA GGCGGGCAAC TCGTTCGGGC TGTTCGGCGA CTTCGCCGCC
CGCCTGGGCC TCACCGTGAA CCGCGTGCGG CTCGCCCCGG GCGCGGGTGT GAGCCTCGCA
CCCTTCGCCG ATGCGCGGCG CCTGGTGGAC ACGCCCAGCC AGGTCCGCAC GCTCGACGCC
GATGCCCTCG ATGAAGGGCC AGATGCCGGC GGCACCGCTT CCGACGGGGA CGAGCAGCGC
GACGTGCTCG GCGAACTGGA GATCACCGCC CGCCTCATGA TTACCGGCGG AGAGGACAAG
GAAGAGGCGC GCATGACGCG CGCCGACCGC AGTCTGATCC GCCAGTGCAT CCTCGATGCC
GCCCGCCGCT GCACGGCCGC GGGCCGCACC GTGCTGACGC GGGACGTGCG CGACGCGCTG
CGCGAACGGG CGGGCGACGC CAACCTGCCC GATATGCGCC GCGCCCGGCT GCTGGAAATG
GCGGATGCCA TGGACATGTT CTGCCAGGGC GCGGACGGAG AGATGTTCGA CCGCGCCGGC
ACGCCCTGGC CCGAGGCCGA CATCACCATC GTGGACCTCG CCACCTACGC GCGCGAGGGC
TATAACGCCC AGCTCTCGGT GGCGTACATC TCGCTCATAA ATACCGTCAA CAACATCGCG
GAGCGCGACC AGTTCCTCGG CCGGCCCATC ATCAACGTCA CCGACGAGGG CCACATCATC
ACCAAGAATC CGCTGCTCGC GCCCTACGTC GTGAAGATCA CGAAGATGTG GCGCAAGCTC
GGCGCCTGGT TTTGGCTCGG GACACAAAAC CTGGACGACC TGCCGAAGGC GGCCGAGCCG
ATGCTGAACA TGATCGAGTG GTGGATCTGC CTGTCCATGC CGCCCGACGA GGTGGAGAAG
ATCGCCCGCT TCCGCGAGCT CAACGCCGCG CAGAAAGCGC TGATGCTCTC GGCCCGCAAG
GAGGCGGGCA AGTTCACTGA GGGCGTGATC CTCTCCAAGT CCATGGAGCT GCTTTTCCGG
GCGGTGCCGC CCAGCCTGTA CCTGGCCATG GCCATGACCG AACCCGAAGA GAAAGCCGAA
CGCTTTGCTT TGATGCAGCA GCACGGCATC AACGAGCTCG ACGCCGCCAT CCTGGTCGCC
GAGCGCATCG ATCGCGCACG CGGCATCGAG CCGCTGCCGC ACCACGCCCT GGGCTGA
 
Protein sequence
MPRHPHWRWS ERAAGALHRL RSGVAAMGSA APDHPGAEPP DAWDTHIARL AENGIPPPGA 
HVRPSGAPPA TEDDERALYG VSPSFVDMLP WAEYLPESRC MLLDDGVSVA AFFELVPIGT
EGREMAWLWQ ARDALENALQ DAFDELDDHP WVVQLYAQDE ASWDRYLRGL DAYVQPRARD
TAFTTFYQRF FAHHLRAIAK PGGLFEDTAV TRLPWRGQAR RVRMVVYRRL GDAASQRRGL
SPEQALATIC DRLQGGLANA GVRAERLGAA DIHAWLLRWF NPQPRLLGDT ALDRERFYDL
TRYPDEAEEG DIELASGTDF TQRLFFGPPR SDVDNGLWWF DGMPHRAVVM DRLRNAPGTG
HLTGETRKGD AINALFDQVP EDTVMCLTLV ATPQDVLESH LNHLARKAVG ETLASEQTRR
DVQEARGLIG SAHKLYRGAL AFYLRGQDLA QLDERGVQLA NVMLGAGLQP VREDDEVAPL
NTYLRWLPCV FDAAKDTRQW YTQLMFVQHA ANLAPVWGRS RGTGHPGITL FNRGGDTITF
DPLNRLDRQM NAHLFLFGPT GSGKSATLNN LLNQVTAMYR PRLFIVEAGN SFGLFGDFAA
RLGLTVNRVR LAPGAGVSLA PFADARRLVD TPSQVRTLDA DALDEGPDAG GTASDGDEQR
DVLGELEITA RLMITGGEDK EEARMTRADR SLIRQCILDA ARRCTAAGRT VLTRDVRDAL
RERAGDANLP DMRRARLLEM ADAMDMFCQG ADGEMFDRAG TPWPEADITI VDLATYAREG
YNAQLSVAYI SLINTVNNIA ERDQFLGRPI INVTDEGHII TKNPLLAPYV VKITKMWRKL
GAWFWLGTQN LDDLPKAAEP MLNMIEWWIC LSMPPDEVEK IARFRELNAA QKALMLSARK
EAGKFTEGVI LSKSMELLFR AVPPSLYLAM AMTEPEEKAE RFALMQQHGI NELDAAILVA
ERIDRARGIE PLPHHALG