| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0492 |
|---|
| Symbol | |
|---|
| ID | 4666990 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 530671 |
|---|
| End bp | 531174 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639821698 |
|---|
| Product | DNA repair protein RadC |
|---|
| Protein accession | YP_968872 |
|---|
| Protein GI | 120609194 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2003] DNA repair proteins |
|---|
| TIGRFAM ID | [TIGR00608] DNA repair protein radc |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCAAC TTGCCACGTC CGAGGTGCTG CAACCCAGCA CTACACCCTG CCCGGCACTC
ACCGTCCAGG AAAGCCGACT GGTCCATCGC GCACTCCACG TGCTGGAGCA GCGCATGTTC
CATCGCGAGG CAGCGATCTC GACCCCGAGG GAGCTTTACG ACTACCTGCG GCTCAAGCTC
GCCGGCGAAC TCCACGAGGT CTTCGGCGTT GTCTTCCTCG ACTGCCAAAA TCGAGCCATC
GCATTCGAGG CCCTGTTCCG AGGGACGATC AATCAGGCGG TGGTCTACCC GCGCGTCATC
GTCAAGCGAG CGATGGATCT GAACGCCAGT TCGGTCATCC TCGTCCATAA CCACCCTTCG
GGCACCTCCC AGTGCAGCGA TGCGGATCGG GGCCTCACGG AGCGCATCTG CGCCTCGCTA
GGCTTGATCG ATGTCCGCGT GGTGGACCAC GTGATCGTCG GCTCGGGCAC GCCCTACTCC
TTCGCCGAAG CCGGCCTGCT CTGA
|
|---|
| Protein sequence | MPQLATSEVL QPSTTPCPAL TVQESRLVHR ALHVLEQRMF HREAAISTPR ELYDYLRLKL
AGELHEVFGV VFLDCQNRAI AFEALFRGTI NQAVVYPRVI VKRAMDLNAS SVILVHNHPS
GTSQCSDADR GLTERICASL GLIDVRVVDH VIVGSGTPYS FAEAGLL
|
|---|
| |