| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0451 |
|---|
| Symbol | |
|---|
| ID | 4668713 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 487320 |
|---|
| End bp | 488228 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 639821658 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_968832 |
|---|
| Protein GI | 120609154 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.382848 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.199451 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAACGCG ACCTCCCGCC ATTGCGCCAG GGCCTGGCCA GCGGCCGCGG CACGCCCGCG
GGCGCCCTGC CGCCCGCGCC CGGCGCCGCG CTCAGGTTCC AGCGCCACCT GCTGGGCGAT
GCGGCCGAAG ACATCCCGCC GGCCACCGGC TTTCTCGCGC CCGGGCGCCG TGCGCTCGCG
AGCGACCCGC GGGACCCGCG GGACCCGCTT CCTGCCGCAC CGCCGCCGTC GCGGGCCACG
GCCGATCCCG CGCCCGGCAC GGACGGCGAT GCGCCACCGC CCGCCACGTC CGCCCTGCCC
GCCCCGCCCC CTCCCGTCGA CACGCCAGAC CTTCCAGCCG CCTTCGGCAT GCCGCGGGCC
GGGGAAGCAG GCCTGCCGGC CGTCCCCGCC GCGCGACCGG ACGACGGCGC CTGCCAGGCC
GGGCCCGAGG CATGTCCGCC GCCCGCCGGT CCGGCAACGG ATGCCGCGGC GGTGCCCACG
TGCCCTCCGC CCCCCGACCC GGTGCCGCCG CCCCCGCCCG CCTGCGGACG CCAGGACGGC
GACGCATCCC GGCAACGGGG GCAGGATTCC GGAGCCGGGC CCTCGGCGGC TTCCGCCCCG
GCGCGACCGG CGGCGGCCGA TGCGCCCGCC TGGCTGCAGG ACACCGTGCA GCGCATCGCA
TGGCTGTGCG CCCAGGCGGA TCCGGCCTTC CAGTCGTGGT CCGTCACGGT GCCGATGGAC
CCCGCCGTGC TCCCGGAAAG CGAAGTGGCC CTCACCCTTT CGCCTTACGC GATGAGCCTT
CGGTTCCGCA CCCGGTCCTG CGAATCGGCA CGACTAATCT CCCTCCATCG CGATCCACTG
CGTGCGCAGC TCGAGGCATT GGGCCCCGGG CAGCGCGGCA TCGACATCGA CCTGGAATCA
CCGCCGTGA
|
|---|
| Protein sequence | MQRDLPPLRQ GLASGRGTPA GALPPAPGAA LRFQRHLLGD AAEDIPPATG FLAPGRRALA
SDPRDPRDPL PAAPPPSRAT ADPAPGTDGD APPPATSALP APPPPVDTPD LPAAFGMPRA
GEAGLPAVPA ARPDDGACQA GPEACPPPAG PATDAAAVPT CPPPPDPVPP PPPACGRQDG
DASRQRGQDS GAGPSAASAP ARPAAADAPA WLQDTVQRIA WLCAQADPAF QSWSVTVPMD
PAVLPESEVA LTLSPYAMSL RFRTRSCESA RLISLHRDPL RAQLEALGPG QRGIDIDLES
PP
|
|---|
| |