| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0404 |
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| Symbol | |
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| ID | 4666590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 434270 |
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| End bp | 435718 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639821611 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_968785 |
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| Protein GI | 120609107 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.383869 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGGTT CCGCGGCGCT GCTGCGCGAG CGCTACGGCG AACGCTACCG GTGGCTGCTG
CTGCTCTCGG TCATGGTCGG CACCATGGCG TCGATCATGT CCTCCACCAT CGTGAACGTG
GCGATCCCGG ACATGAGCCA CCACTTCACG CTGGGGCAGG CGCGGGCCCA GTGGGTCACC
TCGGGCTTCA TGGTGGCCAC CACCGTGGCC ATGCTCACCA CGCCCTGGCT GCTGGCGCGC
TACGGCTACC GGGCCACCTA CGTGGGCGCC ATGGTGCTGC TGCTGGTGGG CGGCATCGGC
GGCGGCGTCG CCGGCCAGTA CGAATGGGTG CTGCTGGCCC GCGTGCTCGA GGGCCTGGCG
GCCGGGGTGG TGCAGCCCAT CCCGGCGGTG ATCATCCTGC ATGCGTTCCA GCCGCACGAG
CAGGGCCGCG CCAGCGGCAT CTTCGGCATG GGCGTGGTGC TGGCGCCCGC CATCGGCCCG
AGCGTCGGCG GCCTGCTCGT GGACTGGTTC GGCTGGCGCT CCATCTTCTT CATGGTGGTG
CCGTTCTGCA TCGCCTCCCT CGCCCTCGCG TACAGGTACG TGCCGGTCAG CAGTCCGGGC
GGCGTGGCCG CGGACCGCTC CGGCGCCTCG CTCGACTCGG CCGGCCTGCT GCTCGGCGCG
GTGGGCACGC TGTGCCTGCT CAACGGGCTG GTATCGCTGC GCGACGGCCC CGCATTCACG
TCGGCCGCCC TGCTCCTGTC CGCGCTCGCA GCCCTGGCCG CGTTCATCGC CTGGGAACGC
CGCATGCTGG CACGCCAGGG CAGGCCGCTG ATGGACCTGC GGCTGTTCGA GGTGCGGCAG
TTCGCCATGG GCAGCATCGT GGCGTTCATC TACGGCACCG CGCTTTTCGG GTCCACCTAC
CTGCTGCCGG TGTTCCTGCA ACTGGGCCTG CAAATGTCGG CATCGCACGT CGGCACGCTG
ATGCTGCCGG CGGGCATCGT GCTGGCGATC ACCATTCCCC TGGTCGGGCG CATGGCCGAC
CGCCAGCCCA CGCACCTGCT CGTGGGCACC GGACTGGCTT TGCTGGCGCT GTCCTTCGGC
CTGATGGCGT TCGTGGAACT GCACACCGCC CTGTGGCTGC TGGTGGCGTT CGCGGTGCTG
GGCCGCATCG GCCTGGGCTT CATCCTGCCG TCCCTCAACC TGGGCGCGAT GCGGCCGCTG
CCCAAGCCGC TCATCGCGCA GGGCTCGAGC GCCATCAGCT TCGTGCGCAT GCTCGGCGGC
GCGGCCGGGG TGAGCCTGTG CGGCATCGTG CTCGAATGGC GCATCGCCGC GCACGGCGAT
TCGCTGCAGA ATGCGGTCAG CAGCCCGGAA CGCATCGCCG CCTTCGGTGA TACCTTCCTC
CTGCTCACCG GGCTGTGCCT GCTGGCCCTG GTGGCAGCCT GGCAGTTGCG CCCGCCGCGC
GAAGGCTGA
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| Protein sequence | MTGSAALLRE RYGERYRWLL LLSVMVGTMA SIMSSTIVNV AIPDMSHHFT LGQARAQWVT
SGFMVATTVA MLTTPWLLAR YGYRATYVGA MVLLLVGGIG GGVAGQYEWV LLARVLEGLA
AGVVQPIPAV IILHAFQPHE QGRASGIFGM GVVLAPAIGP SVGGLLVDWF GWRSIFFMVV
PFCIASLALA YRYVPVSSPG GVAADRSGAS LDSAGLLLGA VGTLCLLNGL VSLRDGPAFT
SAALLLSALA ALAAFIAWER RMLARQGRPL MDLRLFEVRQ FAMGSIVAFI YGTALFGSTY
LLPVFLQLGL QMSASHVGTL MLPAGIVLAI TIPLVGRMAD RQPTHLLVGT GLALLALSFG
LMAFVELHTA LWLLVAFAVL GRIGLGFILP SLNLGAMRPL PKPLIAQGSS AISFVRMLGG
AAGVSLCGIV LEWRIAAHGD SLQNAVSSPE RIAAFGDTFL LLTGLCLLAL VAAWQLRPPR
EG
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