| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0329 |
|---|
| Symbol | |
|---|
| ID | 4669477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 361613 |
|---|
| End bp | 362731 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639821535 |
|---|
| Product | VanZ family protein |
|---|
| Protein accession | YP_968710 |
|---|
| Protein GI | 120609032 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5652] Predicted integral membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0430449 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCACAAGA CCTCCGCCTG GCCGCTCGCG CTGACCTACA TCGCGCTCAT CGTCTTCGCG
AGCCTGTTTC CCTTCGAGGG CTGGCGCGAG CAGGGCATCT CCCCGCTGGT CTTTCTCACG
GCCCGGGTTC CGCCGCCTTA CTGGACCTGG TTCGACGTCA ACATCAACAT CGCCGGCTAT
GCACCGCTGG GCTTCCTGCT GGCCCTGGCG CTGCTGCGCA CCGGCTGGCC CCGGGCCGCC
GTGGCGGTGG CGGTGCTGTC CGGCGGCATG CTCTCCATGC TCATGGAGCT TCTGCAGATC
TACCTGCCGC GCCGGGTGCC GTCCAACACG GACCTGCTGC TCAACACGGC CGGCACCTTG
CTGGGAGCGC TCCTGGCCGC ATTGCTGGAG CGGCTGGGGG CCATCGCCCG CTGGAGCCGG
TTCCGCGCGC GCTGGTTCGT GCAGGACGCG AGCGGCGCCC TGGTGCTCAT CGCGCTCTGG
CCGGCCGCGC TGCTGTTTCC CGCGGCCGTG CCTTTCGGGC TCGGCCAGAT GTGGGAGCGC
CTGGAATCCG CGCTGGCCGA GATCCTCGCC GACACCCCGT TCCTCGAATG GCTGCCGGTG
CGCGACGCGC CGCTGGAGCC CCTGATGCCC GGGGCGGAAC TGCTCGCGGT GCTGCTCGGG
TTGCTCGTCC CCTGCCTGCT GGGCTACTGC GTGATCCGGA GCGTCGGCCG CCGCGTGGCC
TATGCCTGCG GCATGGTCGC CGCCGGGGTG GCGGTGACCG CGCTGTCCGC CGCGCTCAGC
TATGGCCCGG CCCACGCCTG GGAGTGGCTC GGCCTGCCCG CGCGCGTGGG GATCGTCGCG
GGGCTGGTGG CGGCGCTGCT GCTCGTGGCA CTGCCGCGCC GCGCCGCCGG GGTGCTGCTG
CTGCTCGTGC TGGTCTGGCA CCTGAACCTG CTCAACCAGG CGCCGACCAG CGCCTATTTC
GCGGAAACCC TCCTGGCCTG GGAGCAGGGG CGCTTCATCC GCTTCTACGG CCTGGGCCAG
TGGCTCGGCT GGCTCTGGCC CTATGCGACG CTGGTGTATG TGGTGCTGCA GGTCGCCAGC
CGCCCGGCGC CGGAGGCACG CACGGCCCCC GCCTCCTAG
|
|---|
| Protein sequence | MHKTSAWPLA LTYIALIVFA SLFPFEGWRE QGISPLVFLT ARVPPPYWTW FDVNINIAGY
APLGFLLALA LLRTGWPRAA VAVAVLSGGM LSMLMELLQI YLPRRVPSNT DLLLNTAGTL
LGALLAALLE RLGAIARWSR FRARWFVQDA SGALVLIALW PAALLFPAAV PFGLGQMWER
LESALAEILA DTPFLEWLPV RDAPLEPLMP GAELLAVLLG LLVPCLLGYC VIRSVGRRVA
YACGMVAAGV AVTALSAALS YGPAHAWEWL GLPARVGIVA GLVAALLLVA LPRRAAGVLL
LLVLVWHLNL LNQAPTSAYF AETLLAWEQG RFIRFYGLGQ WLGWLWPYAT LVYVVLQVAS
RPAPEARTAP AS
|
|---|
| |