Gene Aave_0258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0258 
Symbol 
ID4668140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp288444 
End bp289223 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content75% 
IMG OID639821464 
ProductIclR family transcriptional regulator 
Protein accessionYP_968639 
Protein GI120608961 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG TGGTGCTCGA CCGCGTCCTG CGCATCCTCG ACCAGCTCTC GCGCTACGAC 
GCGGGAGGAC TCTCGCTGTC GGACATCGCC CGCCAGTCGG GCATACCGCA TCCGACCGTG
CACCGCCTGC TGCGCGACCT CGCGCAGGCG CGCCTCGTGA CGCTGCTGCC CGACGGGCGC
GGCTACGTGC TGGGCCGGCT TGCTTTCGAG GTGGGGCTGG CCGCCCGCGC GCGGCACGAC
GTGGCGCCGC TCTTCGCGGC CCACCTGCGC CGCCTGGCCG AGGCCACGGG CTACGCCGCC
TACTTGTTCG TGCGCAGCGG CCTCGAAGCC GTCTGCCATG ACCACACCCA TGCGCAACGG
CTCGATCCGC CGCTGTCCGT CACCGTGGGC GGCCGCCGGC CGCTGGGCGT GGGCGCCGCG
GGCCTGGCCC TGCTGGCCGC GCAGGACGAT GCCCGGGTGG AGGCGTCGCT CGCGGCCCAT
GCGGGAGTGC TCGGGCGCTA CGGAGGGCTC GACGTGCCGT CGCTGCGCAC GCTCATCGCG
CAAACGCGGG CCCTGGGCTA TGCCCGCAGC GGTGGCTGCC TGAACACCAA CACCGCCGCC
GTGGGCCACG CCGTGCGCGA TCCGGGCGGC TGCGCATTCG CTGCCGTGAG CCTGTCCACC
ACCGTCGCGC GCCTCACGCA GCGCGAGGCC GCCCGCCTGG CGTCGCTGCT GCGCGCGGAG
ATCGCGCAGA TCGAGCCGCG CGTGCACTTC GCGTGGAGCG ACGAAGCCGC GCTGCGGTGA
 
Protein sequence
MTTVVLDRVL RILDQLSRYD AGGLSLSDIA RQSGIPHPTV HRLLRDLAQA RLVTLLPDGR 
GYVLGRLAFE VGLAARARHD VAPLFAAHLR RLAEATGYAA YLFVRSGLEA VCHDHTHAQR
LDPPLSVTVG GRRPLGVGAA GLALLAAQDD ARVEASLAAH AGVLGRYGGL DVPSLRTLIA
QTRALGYARS GGCLNTNTAA VGHAVRDPGG CAFAAVSLST TVARLTQREA ARLASLLRAE
IAQIEPRVHF AWSDEAALR