Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0258 |
Symbol | |
ID | 4668140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 288444 |
End bp | 289223 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 639821464 |
Product | IclR family transcriptional regulator |
Protein accession | YP_968639 |
Protein GI | 120608961 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCG TGGTGCTCGA CCGCGTCCTG CGCATCCTCG ACCAGCTCTC GCGCTACGAC GCGGGAGGAC TCTCGCTGTC GGACATCGCC CGCCAGTCGG GCATACCGCA TCCGACCGTG CACCGCCTGC TGCGCGACCT CGCGCAGGCG CGCCTCGTGA CGCTGCTGCC CGACGGGCGC GGCTACGTGC TGGGCCGGCT TGCTTTCGAG GTGGGGCTGG CCGCCCGCGC GCGGCACGAC GTGGCGCCGC TCTTCGCGGC CCACCTGCGC CGCCTGGCCG AGGCCACGGG CTACGCCGCC TACTTGTTCG TGCGCAGCGG CCTCGAAGCC GTCTGCCATG ACCACACCCA TGCGCAACGG CTCGATCCGC CGCTGTCCGT CACCGTGGGC GGCCGCCGGC CGCTGGGCGT GGGCGCCGCG GGCCTGGCCC TGCTGGCCGC GCAGGACGAT GCCCGGGTGG AGGCGTCGCT CGCGGCCCAT GCGGGAGTGC TCGGGCGCTA CGGAGGGCTC GACGTGCCGT CGCTGCGCAC GCTCATCGCG CAAACGCGGG CCCTGGGCTA TGCCCGCAGC GGTGGCTGCC TGAACACCAA CACCGCCGCC GTGGGCCACG CCGTGCGCGA TCCGGGCGGC TGCGCATTCG CTGCCGTGAG CCTGTCCACC ACCGTCGCGC GCCTCACGCA GCGCGAGGCC GCCCGCCTGG CGTCGCTGCT GCGCGCGGAG ATCGCGCAGA TCGAGCCGCG CGTGCACTTC GCGTGGAGCG ACGAAGCCGC GCTGCGGTGA
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Protein sequence | MTTVVLDRVL RILDQLSRYD AGGLSLSDIA RQSGIPHPTV HRLLRDLAQA RLVTLLPDGR GYVLGRLAFE VGLAARARHD VAPLFAAHLR RLAEATGYAA YLFVRSGLEA VCHDHTHAQR LDPPLSVTVG GRRPLGVGAA GLALLAAQDD ARVEASLAAH AGVLGRYGGL DVPSLRTLIA QTRALGYARS GGCLNTNTAA VGHAVRDPGG CAFAAVSLST TVARLTQREA ARLASLLRAE IAQIEPRVHF AWSDEAALR
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