Gene Aave_0183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0183 
Symbol 
ID4666987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp204738 
End bp206048 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content74% 
IMG OID639821394 
Productbeta-lactamase 
Protein accessionYP_968569 
Protein GI120608891 
COG category[V] Defense mechanisms 
COG ID[COG2367] Beta-lactamase class A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.975829 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCAGC TACCCGCAAC CACGCACCTT CGCTTCCGCC CGTATCGCCC CCTTCGCCCG 
CTCCGGCTCC TGGCCTGCGC CACGTCCGCG CTGTGGCACA TCGCCACGGG CACGGCGCAT
GCCCAGGCCG CGGATGCACC GCCCGCCGCG CTGCCGGCTC CCGCCTCCGC GCCGGCCTGG
GTGCAGCCGC TGGAGCGCGC GCTGGCGCGG GCGGAGGCGG ACAGCGGCGT GCGCATCGGC
GTCCATGTAC GCGATCTGGA GACGGGCGCC TCCGCATCGC TGCATGGCAC GGAGCCGTGG
TACCTGGCCT CGTCCATCAA GGTGCCGGTG GCGATCGCGG TGCTGCGCGG GGCGGAGCGC
GGCGACTTCA CGCTGGACAC GCCCCTCACC CTGCGCGCCG CCGACTACGT GGACGGCGCG
GGCCCCACCA ACGGACGCCC CGTGGGCACG CCCCTCACCG TGCGCTACCT GCTGGAGCAG
ATGATCATCT ACAGCGACAA CACCGCCAGC GACATGCTCA TCGGCCTGGT CGGCATCGGC
ACGGTGAACG CGGTGGTGCA GTCGCTGGTG CCCCGGGGCT TCGGGCGCAT CACCACGCTG
GCCGACGTGC GCCGCCACGT GTACGGCGTG CTCACGCCCG CGGCATCGCA CCTGTCCGGC
ACCGACTTCC TGGCGCTGCG GCAGCAGCAG CGGCTGCATG GCGACGCCGC GGCACGGTCC
GCGCTGGCGA CGCTGCTGCG CGTGCCCGAG CGCTCCCTCG CGCCCGCCGA CCTGGCTTCC
GCCTACGAGA GCTACTACGC CACGGGCCTC AACAGCGGCC GGCTCGACGC CTACGCCGAC
CTGCTGCAGG CACTCGTCGA GGGCCGCGCG CTCGATGCCC GGCACACGGC CTACCTGCTG
TCCGTGATGG AGCGCGTGAA AACCGGCCCC CAGCGCATCA AGGCGGGACT ACCGCCGGGT
GCGCGCTTCG CCCACAAGAC CGGCACGCAG CGCGCACGAA CATGCGATTC AGGCTTGGTC
ACCGTGCCGC GCGCCCTTCC GGAGCGGCGG GTGCTGGTGG TGGCCTGCAC GCGCGGCGAA
CCTTCCACGG CCCGGTCCGA TCGCGCGCTC CGGCAGGTGG GCATCGCCCT TTGCCAGTCG
GGCCTGCTGT CCGACGGGAG ATCGCATGAA CCACGCTGCC CCACCCTGCC CCCCCGGGCT
TCCGGCGCCA CGGCCGCGCC CGCAGGCGGC GAGGCGCCGG CGGCTCGCCC GCACGGTGCT
GGCGGCGGTG CTGCCCCTGC TGCTGGCGGC GCTGGGGACG ACGACGCCTG A
 
Protein sequence
MPQLPATTHL RFRPYRPLRP LRLLACATSA LWHIATGTAH AQAADAPPAA LPAPASAPAW 
VQPLERALAR AEADSGVRIG VHVRDLETGA SASLHGTEPW YLASSIKVPV AIAVLRGAER
GDFTLDTPLT LRAADYVDGA GPTNGRPVGT PLTVRYLLEQ MIIYSDNTAS DMLIGLVGIG
TVNAVVQSLV PRGFGRITTL ADVRRHVYGV LTPAASHLSG TDFLALRQQQ RLHGDAAARS
ALATLLRVPE RSLAPADLAS AYESYYATGL NSGRLDAYAD LLQALVEGRA LDARHTAYLL
SVMERVKTGP QRIKAGLPPG ARFAHKTGTQ RARTCDSGLV TVPRALPERR VLVVACTRGE
PSTARSDRAL RQVGIALCQS GLLSDGRSHE PRCPTLPPRA SGATAAPAGG EAPAARPHGA
GGGAAPAAGG AGDDDA