Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0183 |
Symbol | |
ID | 4666987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 204738 |
End bp | 206048 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639821394 |
Product | beta-lactamase |
Protein accession | YP_968569 |
Protein GI | 120608891 |
COG category | [V] Defense mechanisms |
COG ID | [COG2367] Beta-lactamase class A |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.975829 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCCAGC TACCCGCAAC CACGCACCTT CGCTTCCGCC CGTATCGCCC CCTTCGCCCG CTCCGGCTCC TGGCCTGCGC CACGTCCGCG CTGTGGCACA TCGCCACGGG CACGGCGCAT GCCCAGGCCG CGGATGCACC GCCCGCCGCG CTGCCGGCTC CCGCCTCCGC GCCGGCCTGG GTGCAGCCGC TGGAGCGCGC GCTGGCGCGG GCGGAGGCGG ACAGCGGCGT GCGCATCGGC GTCCATGTAC GCGATCTGGA GACGGGCGCC TCCGCATCGC TGCATGGCAC GGAGCCGTGG TACCTGGCCT CGTCCATCAA GGTGCCGGTG GCGATCGCGG TGCTGCGCGG GGCGGAGCGC GGCGACTTCA CGCTGGACAC GCCCCTCACC CTGCGCGCCG CCGACTACGT GGACGGCGCG GGCCCCACCA ACGGACGCCC CGTGGGCACG CCCCTCACCG TGCGCTACCT GCTGGAGCAG ATGATCATCT ACAGCGACAA CACCGCCAGC GACATGCTCA TCGGCCTGGT CGGCATCGGC ACGGTGAACG CGGTGGTGCA GTCGCTGGTG CCCCGGGGCT TCGGGCGCAT CACCACGCTG GCCGACGTGC GCCGCCACGT GTACGGCGTG CTCACGCCCG CGGCATCGCA CCTGTCCGGC ACCGACTTCC TGGCGCTGCG GCAGCAGCAG CGGCTGCATG GCGACGCCGC GGCACGGTCC GCGCTGGCGA CGCTGCTGCG CGTGCCCGAG CGCTCCCTCG CGCCCGCCGA CCTGGCTTCC GCCTACGAGA GCTACTACGC CACGGGCCTC AACAGCGGCC GGCTCGACGC CTACGCCGAC CTGCTGCAGG CACTCGTCGA GGGCCGCGCG CTCGATGCCC GGCACACGGC CTACCTGCTG TCCGTGATGG AGCGCGTGAA AACCGGCCCC CAGCGCATCA AGGCGGGACT ACCGCCGGGT GCGCGCTTCG CCCACAAGAC CGGCACGCAG CGCGCACGAA CATGCGATTC AGGCTTGGTC ACCGTGCCGC GCGCCCTTCC GGAGCGGCGG GTGCTGGTGG TGGCCTGCAC GCGCGGCGAA CCTTCCACGG CCCGGTCCGA TCGCGCGCTC CGGCAGGTGG GCATCGCCCT TTGCCAGTCG GGCCTGCTGT CCGACGGGAG ATCGCATGAA CCACGCTGCC CCACCCTGCC CCCCCGGGCT TCCGGCGCCA CGGCCGCGCC CGCAGGCGGC GAGGCGCCGG CGGCTCGCCC GCACGGTGCT GGCGGCGGTG CTGCCCCTGC TGCTGGCGGC GCTGGGGACG ACGACGCCTG A
|
Protein sequence | MPQLPATTHL RFRPYRPLRP LRLLACATSA LWHIATGTAH AQAADAPPAA LPAPASAPAW VQPLERALAR AEADSGVRIG VHVRDLETGA SASLHGTEPW YLASSIKVPV AIAVLRGAER GDFTLDTPLT LRAADYVDGA GPTNGRPVGT PLTVRYLLEQ MIIYSDNTAS DMLIGLVGIG TVNAVVQSLV PRGFGRITTL ADVRRHVYGV LTPAASHLSG TDFLALRQQQ RLHGDAAARS ALATLLRVPE RSLAPADLAS AYESYYATGL NSGRLDAYAD LLQALVEGRA LDARHTAYLL SVMERVKTGP QRIKAGLPPG ARFAHKTGTQ RARTCDSGLV TVPRALPERR VLVVACTRGE PSTARSDRAL RQVGIALCQS GLLSDGRSHE PRCPTLPPRA SGATAAPAGG EAPAARPHGA GGGAAPAAGG AGDDDA
|
| |