Gene Aasi_1447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_1447 
Symbol 
ID6377491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp1872729 
End bp1873754 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content34% 
IMG OID642682516 
Producthypothetical protein 
Protein accessionYP_001958465 
Protein GI189502748 
COG category[L] Replication, recombination and repair 
COG ID[COG1466] DNA polymerase III, delta subunit 
TIGRFAM ID[TIGR01128] DNA polymerase III, delta subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACTA TGACACCTCA ACAAGCACTT GACCTGCTTA AGAAACAACA ATATGCTCCT 
GTTTACTTTT TACAGGGAGA AGAAGTGTAT TATATAGATC TTATCATCGA TTATTTAGAA
AATAACTTAT TAGAAGAATC TGAGAAAATC TTTAATTTAA CTATTCTATA TGGCAAAGAG
CAATCTATAG CACAAGCCAT AAGCCAATCT AAACAATATC CTGTAGGAGT GGAACGGCAA
GTAGTTATTG TAAAAGAAGC ACAAGATTTA CAAGATTTAA ACCGCGATGC AGGCCAAACA
CTTTTGGCAA ATTATATTAA GATGCCTAAT CCCACTACAA TATTAGCATT TGGCTATAAG
CATAAAACAT TATCTACCAA AACAACCCTC AGTAAAGTGT TAGCAGAACA TGCGGTACTC
GTAAATGCTA AACGATTGTA TGATAACCAG CTGCCAGCTT GGATTAGTAA CTATGTTACA
GAGAAAGGGC TACATATTGC AGAAAAAGCT ATTTTTATGC TGCAAGAGTT TATTGGCAGT
GACTTAGTCC GGTTAGCTAA AGAGCTAGAT AAAGTAGCTT TAAATCTACA ACCAGGAGGC
AAAATTACCG ATAATATTAT TCAGGAATAC GTAGGAATCA GTAAACAGTT TAATGCCTTC
GAGCTACAAA GTGCTATAGC CACACGAGAT GTATATAAAG CCAACCAAAT TATTTTTCAT
TTAATTGGAA ACAACAAAAG CCAAATAGCT ATTCCCTTGA TTGGCTTATT GTTTACCTTT
TTTAGTAAAA TACTTTTGCT TCACCAAGCA CGTGATAAGT CTTCACAAGC ATTATCACAA
GCTTTACAAA TAAATGCGTA CTTTGTACCT CAGTATATAG CAGCAGCTAA GCAATATTCT
ATTTCTAAGA TCGTTGAAAA TATAAATCAT TTACAAGAAG CAGATATGCA GCTCAAAGGA
GTGGCTTATG CCTTTGTGGG AGAAGAAGAA ATTCTAAAAG AATTAGTGTT TAAGCTTCTG
CATTAA
 
Protein sequence
MATMTPQQAL DLLKKQQYAP VYFLQGEEVY YIDLIIDYLE NNLLEESEKI FNLTILYGKE 
QSIAQAISQS KQYPVGVERQ VVIVKEAQDL QDLNRDAGQT LLANYIKMPN PTTILAFGYK
HKTLSTKTTL SKVLAEHAVL VNAKRLYDNQ LPAWISNYVT EKGLHIAEKA IFMLQEFIGS
DLVRLAKELD KVALNLQPGG KITDNIIQEY VGISKQFNAF ELQSAIATRD VYKANQIIFH
LIGNNKSQIA IPLIGLLFTF FSKILLLHQA RDKSSQALSQ ALQINAYFVP QYIAAAKQYS
ISKIVENINH LQEADMQLKG VAYAFVGEEE ILKELVFKLL H