Gene Aasi_1212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_1212 
Symbol 
ID6377249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp1547516 
End bp1548430 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content38% 
IMG OID642682311 
Producthypothetical protein 
Protein accessionYP_001958269 
Protein GI189502552 
COG category[R] General function prediction only 
COG ID[COG0790] FOG: TPR repeat, SEL1 subfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000321675 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAAG CTTCTTTACC TCAACAATAC ATAGCCTTTG TTTTACTTGG CAGCTTATTT 
TTACAAAATT GTAGGGGTTC AAGCAATTTA CCTATTCAAG AAGTAGGGAA TATAACAGAA
ACTGTAGAAC AGGAAGGAGT TGTTAGAAAA GGGATAGAAA AAGGAAAAAT AGAATTAACA
AAAGAGCAGG GGATAAGGGG AGTGGATGAT GAGGAAGGAG AACCTACCTA TAAAGAATGG
TTAAAACATG AACGTCGAGG AAAGAGTAAA AATGAGGAGA AAGGACAACT ACAGACTGGA
AGGAAAGAGC AAGAGCAACA AAGCCATTCG GTTGAAATTG ACAAGACATA TGTAGAATCT
AGTATTGTAG TCTTAGCGGA AAAAGCAGCT GAGCAAGGCA ATGTTGTTGC ACAACGTGAT
ATGGGATTTA TATATCAAAA TGGAAGGTCA GGATTACCAC AAGATGATAA AAAAGCAATA
GAATGGTTTA AAAAATCAGC TATACAAGGC TATGTATATG GACAAACTAA CCTAGCGTGG
ATGTATTATA ATGGCAAGGG AACGGCTCGA AATTATCATG AAGCATTTAA ATGGTATCAA
AAGGCCACCG CTCAAGGGCA TCCCAATGCT CAATGTAGAC TAGGCTGGAT GTATCAAACT
GGAAGAGGAG TAAGGAGAGA TTATATAAAA GCTAGAGAAT GGTACGAGAA AGCAGCTGCA
CAAGGAAATG CACAAGCCCA ATTTAATTTA GGAGAGACAT ACCAGAATGG TTGGGGAGTA
AAGAAGGACT ATGCTAAAGC ACTTGAATGG TTCCAAAAAG CTGCCGAGCA AGGAAATGTA
GGAGCACAAC ATAAGCTAGG CGAAATGTAT TATTATGGGC AAGGAATCCA GAAGAATTAT
ACAAGGACAA AATAG
 
Protein sequence
MKKASLPQQY IAFVLLGSLF LQNCRGSSNL PIQEVGNITE TVEQEGVVRK GIEKGKIELT 
KEQGIRGVDD EEGEPTYKEW LKHERRGKSK NEEKGQLQTG RKEQEQQSHS VEIDKTYVES
SIVVLAEKAA EQGNVVAQRD MGFIYQNGRS GLPQDDKKAI EWFKKSAIQG YVYGQTNLAW
MYYNGKGTAR NYHEAFKWYQ KATAQGHPNA QCRLGWMYQT GRGVRRDYIK AREWYEKAAA
QGNAQAQFNL GETYQNGWGV KKDYAKALEW FQKAAEQGNV GAQHKLGEMY YYGQGIQKNY
TRTK