| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_1179 |
|---|
| Symbol | clpX |
|---|
| ID | 6377421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010830 |
|---|
| Strand | - |
|---|
| Start bp | 1513252 |
|---|
| End bp | 1514463 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 642682282 |
|---|
| Product | ATP-dependent protease ATP-binding subunit ClpX |
|---|
| Protein accession | YP_001958241 |
|---|
| Protein GI | 189502524 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.124063 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATACTA TTTACTGTTC TTTTTGCAGA AAAAGTAATG AAACGGTAGA GGTAATGATA
TCTGGCCACA CAGCTCATAT ATGTGACAGA TGTATTGAAG AAGCTCTACT ACTCATTGAT
AGGGAAAGAA TTCATAAACC TGTCCCTACC AACTTAGAAA TCCTCACTCC AAAAGAAATT
AAAGCATATC TAGATCAATA TGTTATTGGT CAAGATGTGG CAAAGAAAAC GCTTGCTGTT
GCCGTTTATA ACCACTATAA AAGGTTAAGA CAGTCTTACG AAGAGGAAGA TGGGATTACA
ATAGAAAAAT CAAATATCTT GCTGTTAGGC GAGACAGGAA CTGGCAAAAC TTACTTAGCG
CGTACGCTAG CAAAACTTCT TCATGTACCA TTTTGCATGG CAGATGCTAC AGTTTTAACG
GAAGCAGGAT ATGTGGGTGA GGACGTAGAA AGCATACTTA CCAGACTTTT ACAAGCAGCC
GAATATGATG TGGCTGCTGC TGAAAGAGGC ATTGTCTATA TAGATGAAAT AGATAAGATT
GCACGTAAAG GAGATAATCC TTCTATTACC CGCGACGTAA GTGGAGAAGG TGTACAACAA
GCTTTACTAA AATTACTAGA AGGTACTATT GTTAATGTGC CTCCACAAGG TGGAAGAAAA
CATCCAGACC AAAAAATGAT ACCAGTAAAT ACAGAAAATA TTCTGTTTAT ATGCGGTGGG
GCTTTTGAAG GTATGGATAA AATTATTAGT AAAAGGCTTA ATGCCGGCAC TCTAGGTTTT
GATATTGCCC AGTCTAGAAG CCAAGGAACA AGAGAAACTA GTAACCTTTT AAAACATGTT
TCTTCCAATG ATTTAAGAGT CTATGGCTTA ATTCCTGAAT TAATAGGTAG GCTTCCAATC
ATTAGCTATC TAAACCCAAT TGATGCAAAA GCTTTAAAAA GTATCCTTAC AGAGCCTAAG
AACTCATTGA TTAAGCAGTA TACTAAGCTT TTTGCTATGG ATAATGTACA ATTAACCATT
ACTGAAGATG CGCTCGACTA TATGGTAGAA CAGGCGCTCT CTCTTAAATT AGGGGCTAGA
GGCTTAAGAT CTATCTGCGA GGCAGTTATT ATGGATGCCA TGTTTGAGCT GTCTTCTGAA
AAAGAAGCCG CTGTCTTATT AATAGATAAA AACTATGCAA TTAGTAAGCT ATCTGCTGCT
AAAGTAGCGT AA
|
|---|
| Protein sequence | MDTIYCSFCR KSNETVEVMI SGHTAHICDR CIEEALLLID RERIHKPVPT NLEILTPKEI
KAYLDQYVIG QDVAKKTLAV AVYNHYKRLR QSYEEEDGIT IEKSNILLLG ETGTGKTYLA
RTLAKLLHVP FCMADATVLT EAGYVGEDVE SILTRLLQAA EYDVAAAERG IVYIDEIDKI
ARKGDNPSIT RDVSGEGVQQ ALLKLLEGTI VNVPPQGGRK HPDQKMIPVN TENILFICGG
AFEGMDKIIS KRLNAGTLGF DIAQSRSQGT RETSNLLKHV SSNDLRVYGL IPELIGRLPI
ISYLNPIDAK ALKSILTEPK NSLIKQYTKL FAMDNVQLTI TEDALDYMVE QALSLKLGAR
GLRSICEAVI MDAMFELSSE KEAAVLLIDK NYAISKLSAA KVA
|
|---|
| |