Gene Aasi_0365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_0365 
Symbol 
ID6377318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp435430 
End bp436653 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content35% 
IMG OID642681535 
Producthypothetical protein 
Protein accessionYP_001957517 
Protein GI189501800 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0643431 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATACTG CTTTTTTTAT TGCAAAGCGC TATTTTTCAA CCAAATCTAA AGGTAATTTG 
ATTTACCGTA TGAGCCTTAT TGCTTGCTTA AGCGTTGCAC TAGGTACCAT GGCTTTATTA
GTAGTCCTAT CAATATTTAA CGGGTTAGAA GGGGTAGTTA GAAGGCTATT TTATGCATTT
GATCCTGATA TTAAAATAGA GTTAAAGCAA GGCAAGTATT TCTCTATATC TCCTGAATTG
ATACACAAAA TTGAATCTGT ATCTGAAGTA ACCAAAGTAG TAGAAGTTAT AGAAGAAAAT
GTCCTATTTA CTTATCATGG ACACCAGTTG GTAGCTAAAC TAAAAGGCGT ATCAAGAAAC
TTTGTACAAG ATTGCCCATT AGCTACACAC ATTATACAAG GCAAGCTTGA GCTAGAGCAA
GACGGCCATA ACTTTGCATT AGTAGGTGCT GGCATACAAT ATGCCCTCTC TATTCGATTA
AATAATATAT TTGAAGAGCT GCAAGTATTT TATCCTAAAA ACAATAAGCT AAGTGCACTT
ACAGCACAAA ATCTTTATCA GACAGGGTGG ATTAAACCTG GTGCAATCTT TGCTATTGAA
AAGCATTTTG ATGAAAACTA TGTAATTGTA CCATTGAATT TTGCTACAAA CTTACTGGGA
AATAGTGACA AACGAACTGC CCTTGAAGTA CAAGTAATGC AAGGAAGTTC TATAGCAAAA
GTACAAAAAG CACTTCAAAC ATTTCTACCT CAAGAATTTA AGGTACTTAA TAGGGATGAG
CAGCAAATGA CACTTATGCA AACCATACGT ATTGAAAGGA TGCTGGTATT TATGACTTTT
GCATTTATTG TGATTGTTGC TTCGCTTAAT ATATTCTTTA TTTTATCTAT GTTAGTACTA
GCCAAGCGAC CAGACATAGC TATTTTATAT TCCTTAGGTG CTACTTCAAG AACTATAAGA
AATATATTCT TATTGAATGG ATTACTCATT GGGCTAAGTG GTGCTCTAGC AGGCATGCTA
CTAGCATGGT TTTTGACTTG GCTTCAACAA AAATTTGGGA TTATATCTAT GGGTATGCAA
ACTAGCTTGA TTGAAGCCTA TCCTGTTAAA AGACAAATTA GTGATTTTAT ATACGTAGGT
ATAGGTGTAT TCCTAACGAC TTTAGTGGCT AGCTATAGAC CTGCCCTACT AGCTAGCAGA
ATTAATATAA GGGAACATTT ATAA
 
Protein sequence
MHTAFFIAKR YFSTKSKGNL IYRMSLIACL SVALGTMALL VVLSIFNGLE GVVRRLFYAF 
DPDIKIELKQ GKYFSISPEL IHKIESVSEV TKVVEVIEEN VLFTYHGHQL VAKLKGVSRN
FVQDCPLATH IIQGKLELEQ DGHNFALVGA GIQYALSIRL NNIFEELQVF YPKNNKLSAL
TAQNLYQTGW IKPGAIFAIE KHFDENYVIV PLNFATNLLG NSDKRTALEV QVMQGSSIAK
VQKALQTFLP QEFKVLNRDE QQMTLMQTIR IERMLVFMTF AFIVIVASLN IFFILSMLVL
AKRPDIAILY SLGATSRTIR NIFLLNGLLI GLSGALAGML LAWFLTWLQQ KFGIISMGMQ
TSLIEAYPVK RQISDFIYVG IGVFLTTLVA SYRPALLASR INIREHL