| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_0293 |
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| Symbol | |
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| ID | 6377574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010830 |
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| Strand | + |
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| Start bp | 337741 |
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| End bp | 339771 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 642681475 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_001957460 |
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| Protein GI | 189501743 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0614567 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCTTTA AACTTACAGC CCCTTACCAA CCCACTGGTG ATCAGCCACA AGCTATTCAG
CAACTAGTAC ATGGTATTAA TACAGGAGAA AGATCACAAA CCTTACTAGG CGTAACAGGC
TCAGGGAAAA CTTTTACTAT GGCTAATGTC ATACAAGCAG TAAATAAACC AACCCTAGTA
ATGAGCCATA ATAAGACTTT AGCAGCCCAG TTATATGGAG AATTAAGAAA CTTTTTTCCT
GAAAATGCTG TAGAGTATTT TGTATCCTAT TATGATTACT ACCAACCAGA AGCATATATA
CCTGCTACCA ATGTTTATAT AGAAAAAGAT CTTAGTATAA ACGATGAATT AGAAAAGTTA
AGGCTAAGAG CCACCTCAGC CTTACTTACA GGCAGAAGAG ACGTTATCAT TGTAGCTTCT
GTCTCCTGCA TTTACGGTAT TGGAAACCCA GAAGAATTTG GTAAAAATAT ATTACGCTTA
CAGGTAGGCG AAAGAATTGC TCGTAACAAA CTGCTTTTAA ACTTTGTAGA TATGCTGTAT
AGTAGGAATG AACAAGAGTT TAGCAGGGGC CATTTTAGAG TAAAAGGAGA CACGATAGAT
ATATTCCTAG CTTATGCAGA TTACGCTTAT AGGTTTCTAT TTTGGGGTGA TGAGATAGAA
GCTATCCATA GCATAGACCC TAATACAGGA CAAAAGCTTT CTGAAGAAAG ACAGGTACTT
ATTTTTCCTG CTAATTTATT TGTAACGAGC AAGGATACCC TACAGCAAGC AATTCATGAA
ATCCAAGATG ATTTAGTAGC ACAAATCAAG TTTTTTGAAA ACGAAGGACG ATTTGATGAG
GCTAAAAGAA TTCAAGAGAG AACCGAGCTA GATTTGGAAA TGATGCGTGA ACTGGGATAT
TGTTCAGGAA TCGAAAATTA CTCCCGTTAC TTTGATAAGC GCCAACCAGG TATGCGTCCA
TTCTGTCTAG TCGATTATTT TCCTAAAGAC TATCTGTTGA TGATCGACGA AAGCCATGTA
ACAATACCAC AAATACGTGC TATGTGGGGA GGAGACAGGG CTAGAAAAGT AAATCTAGTA
GATAATGCTT TCCGATTACC TGCTGCACTT GATAATAGAC CTCTAAATTT TAATGAGTTT
GAAACGCTCA TCAATCAAGT AATTTTTGTA AGTGCTACAC CTAGCGACTA CGAACTAAGG
CACTCAGAAG GTGTAGTGGT AGAACAATTA ATTCGTCCTA CAGGATTATT AGATCCAGAA
ATAGAAGTAA GGCCCAGCCT CAACCAGATT GACGATTTAC TAAATGAGGT AGCAGATCGC
ATAAAAAAGA AAGAGCGTGT GCTAATTACA ACACTGACCA AGCGTATGGC AGAGGAGTTA
ACCAAATATT TAGAAAGAGC AGGCGTCAAG TGTAGCTATA TACATTCTGA AATAAAGACA
TTAGAAAGAA TAGACATACT ACGAGACTTA AGACTAGGGG TAATTGATGT ATTAGTAGGC
GTAAATTTAC TAAGAGAAGG ATTAGATTTA CCAGAGGTTT CACTGGTAGC CATTTTAGAT
GCTGACAAGG AAGGTTTTTT AAGAAATGTA AAGTCACTTG TACAAACTAT TGGAAGAGCA
GCTAGGAATG AAGATGGCAA AGTAATCATG TATGCGGATA CCATTACAAA ATCCATGGAA
ACGGCCATTG ACGAAACAAG CAGAAGACGC AGCATACAGA TGGAATATAA TCTAAAACAT
AACATCACAC CTAGATCAGT ACATAAATCT AGAGAAGCTA TCTTAGAGCA AACAAAAGTA
GGAGACACGC CACAAGCAGC CCAGTACTAT GTAGAAAAAG AACCAAGTGT AGCAGCTGAT
CCTATCATAC CTTACATGCG TAGAGATGAG CTGGATAAGC TTATACAGGC CACAGAAAAG
AAAATGTTGG CTGCAGCAGA CAAACTAGAC TTCATAGAAG CTGAACGCCT TAAAAACGAG
CTAGAGGCCC TAAAACAGAT TGTTGCTAAC AAAACCTACA AGAATAATTA A
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| Protein sequence | MTFKLTAPYQ PTGDQPQAIQ QLVHGINTGE RSQTLLGVTG SGKTFTMANV IQAVNKPTLV
MSHNKTLAAQ LYGELRNFFP ENAVEYFVSY YDYYQPEAYI PATNVYIEKD LSINDELEKL
RLRATSALLT GRRDVIIVAS VSCIYGIGNP EEFGKNILRL QVGERIARNK LLLNFVDMLY
SRNEQEFSRG HFRVKGDTID IFLAYADYAY RFLFWGDEIE AIHSIDPNTG QKLSEERQVL
IFPANLFVTS KDTLQQAIHE IQDDLVAQIK FFENEGRFDE AKRIQERTEL DLEMMRELGY
CSGIENYSRY FDKRQPGMRP FCLVDYFPKD YLLMIDESHV TIPQIRAMWG GDRARKVNLV
DNAFRLPAAL DNRPLNFNEF ETLINQVIFV SATPSDYELR HSEGVVVEQL IRPTGLLDPE
IEVRPSLNQI DDLLNEVADR IKKKERVLIT TLTKRMAEEL TKYLERAGVK CSYIHSEIKT
LERIDILRDL RLGVIDVLVG VNLLREGLDL PEVSLVAILD ADKEGFLRNV KSLVQTIGRA
ARNEDGKVIM YADTITKSME TAIDETSRRR SIQMEYNLKH NITPRSVHKS REAILEQTKV
GDTPQAAQYY VEKEPSVAAD PIIPYMRRDE LDKLIQATEK KMLAAADKLD FIEAERLKNE
LEALKQIVAN KTYKNN
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