Gene Aaci_3061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_3061 
Symbol 
ID8417569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013207 
Strand
Start bp11093 
End bp12394 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content49% 
IMG OID645029184 
ProductNHL repeat containing protein 
Protein accessionYP_003186450 
Protein GI257793052 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2133] Glucose/sorbosone dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGGCGAG CTAGGCCCTT GAATCCCGAT GACATTATTG TACCTTCACA GTACCGGATT 
GAGGTTTTCG CTGAAGGCTT AACAGCACCC ATCAGTCTGA CCTTCATGGA CACAGGGGAT
ATGCTTGTCG CAGATGCCGG GATCACTGAT GGGAACGGTA AGGTTCTAAA ACGCACAACA
AATGGCTTTG TGGTGATAGC GGAAGGTTTT GACCCTCCTT TGACAGGAAT TAATGTCTAT
CAAGGGCATA TTTATGTTTC CCATCGAGGC ACAATCACAG TTGTGAAACC GGATGGTCAC
AAACAAGATA TCTTGAGTGG ACTGCCAAGC TGGGGTGATC ATCATAACAA TCAGGTGGTT
TTTGGGCGGG ACGGAAAAAT GTATTTCGGA CAAGGGACGG CAACGAACTC CGGTGTAGTG
GGCGAAGATA ATAGATGGGT AAAGAAATAT CCGTTATTCC ATGATTATCC CGGCATGTCG
ATTCGGCTGT CAGGTCAAAA CTTCATCACG AGGAACGTTC TGTCGCAGGC GGCGCACGAT
CTAGCGGTCA CAGGGGCTTA CTCACCGTTC GGTGTGCCAA CGAATCCCGG GGAGCAGGTC
AAAGAGATCG TGAAAGCCAG TGGAAGCATT TTACGTGCTA ATCCAGATGG TTCGGATCTA
CAACTGGTTG CATGGGGGTT ACGTAACCTA TTCCGAATTA AATTTGATCG TAAAAATCGA
CTCTTTGCTG CAAACCACGG GATGGATGAG AGAGGAAGTC GTCCGGTTGC TAACTCCCCG
GACGAGTTCC ACAGGATACG ATTCGGTGTA TGGTATGGAT GGCCAGATTA TACGGGAGGA
TACCCGGTAA CTTTGCCTCG GTTTAAACCG GCCGGAAAGC CGCAACCGAC ATTCCTACTG
TCTGAGCACC CTATGCTTCC ACCACATCCT ATTGCCATAT TCGCACCTCA TTCCGCCATC
ATGGGATTTG ATTTCAATTA CGATCCGAAC TTTGGACCGG TGGGAGAAGT CTTTATCGCC
GAATTTGGAA GTGAAGCTCC TGGGACGACA GGTGGAAAAC CAGCACCTCG AGTCGGCCAT
CGTGTCTCAC GGATCGATAT AAAAACAGGC AAGGTAAGGA ACTTCGCTAT GAACCGTTCA
GGATATGCAG CTTCCCACAC AGGAAGCGGA GGATTGGAAC GGCCAATCGA TGTCGTTTTT
GGTCCAGATG GTAGCATGTA TGTTGTTGAT ATGGGCATAA CAGTTGGATT CGGCAATTTA
ATACCTAATA CCGGTGTGAT TTGGCGGATC AGTCGAACAT AA
 
Protein sequence
MGRARPLNPD DIIVPSQYRI EVFAEGLTAP ISLTFMDTGD MLVADAGITD GNGKVLKRTT 
NGFVVIAEGF DPPLTGINVY QGHIYVSHRG TITVVKPDGH KQDILSGLPS WGDHHNNQVV
FGRDGKMYFG QGTATNSGVV GEDNRWVKKY PLFHDYPGMS IRLSGQNFIT RNVLSQAAHD
LAVTGAYSPF GVPTNPGEQV KEIVKASGSI LRANPDGSDL QLVAWGLRNL FRIKFDRKNR
LFAANHGMDE RGSRPVANSP DEFHRIRFGV WYGWPDYTGG YPVTLPRFKP AGKPQPTFLL
SEHPMLPPHP IAIFAPHSAI MGFDFNYDPN FGPVGEVFIA EFGSEAPGTT GGKPAPRVGH
RVSRIDIKTG KVRNFAMNRS GYAASHTGSG GLERPIDVVF GPDGSMYVVD MGITVGFGNL
IPNTGVIWRI SRT