Gene Aaci_2946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2946 
Symbol 
ID8426487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp3015846 
End bp3016496 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content65% 
IMG OID645029072 
Productsingle-stranded nucleic acid binding R3H domain protein 
Protein accessionYP_003186338 
Protein GI258512904 
COG category[R] General function prediction only 
COG ID[COG1847] Predicted RNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.0000137296 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAAAAG TGGTGGCGAC GGGCAAGACC ATCGAAGAAG CGGTGATGTC GGCGCTGGTG 
AGGCTCGGTG TGCCGAGATC GCAGGCGCAG GTGCGTGTCA TCCGGGAACC GGCTCGGGGA 
TTTCTCGGAT GGCTGAGCGG CCGGGAGGCG GAGGTCGAGG TGACGGTCAT CGAGACGCCC 
CTCGACGCCG CGAAGGAGTT TTTGCGGACC GCCATCTCGA AAATGGGGCT TGGCCAGGCC 
GTGATCGTCG CGGACGATGT CGACGAGGAA GGTCATGTGA AACTGTCGAT CTCGGCGGAC 
GAGGACGCCC TGCCCATCCT CATCGGCCGG CGCGGTGCAA CGCTGGACGC GCTGCAATAT 
CTGGTGAACA TCGTGGCGAA TCGGGATGCG TCGGAGAAAA TGCGATTCAC GCTCGACGCG 
GCGGGCTATC GGGATCGTCG GTTGGAGTCG CTCAGGCGGC TGGCGGACGA GGCGGCGGAC 
AAGGCGGTGC GGCTGGGGAG ACCGGTGGCG CTCGATCCAA TGCCGCGAAA GGATCGCAAG 
TGGGTGCACG CCCACCTGCA GTCGAGAGGC GACGTCGTGA CGGTCAGCGA AGGCCAGGAG 
CCGTATCGCC GTGTGAAGAT CATTCCGAAG CGCCACGATT GGATCGAATG A
 
Protein sequence
MRKVVATGKT IEEAVMSALV RLGVPRSQAQ VRVIREPARG FLGWLSGREA EVEVTVIETP 
LDAAKEFLRT AISKMGLGQA VIVADDVDEE GHVKLSISAD EDALPILIGR RGATLDALQY 
LVNIVANRDA SEKMRFTLDA AGYRDRRLES LRRLADEAAD KAVRLGRPVA LDPMPRKDRK 
WVHAHLQSRG DVVTVSEGQE PYRRVKIIPK RHDWIE