Gene Aaci_2886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2886 
Symbol 
ID8426427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp2949659 
End bp2950525 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content66% 
IMG OID645029013 
Product5-carboxymethyl-2-hydroxymuconateDelta- isomerase 
Protein accessionYP_003186279 
Protein GI258512845 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.123342 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTCT GCACCTACCG GGAAGGGAGC GCGCTGCGGC TCGGCCTTGT GCGCGGCGAC 
GAGGTGGTGG ACGTCGCGGC GAGCGCGGCG CAACTCAGGA TCTCGGTGCC CGAAACGATG
GAGGCCGTGA TCGCGGAATA TACTCACGTT CGGCGCGCGC TCGAGGCCAT CGAGGAGAAG
GGCGTTCCCG CCGGGAAGCT GTCGGACCTG CGGCTCGCGC CTCCCGTCAC CCGCCCGCAG
AAGATCCTGT GCGTGGGGCT CAACTACCGC AAGCACGCCG AGGAGTCGAA GATGCCGATT
CCCTCGTCGC CGGTCTATTT CGCCAAATTT GCGAACAGTC TGGCCGCGCA CGGGGACGAG
ATCGCCATTC CCGAGGTGGC GCGCGAGGTG GACTACGAGG TGGAACTGGT GGCGGTCATC
GGCCGCAGGT GCCGCAACGT CTCAGAGGAG GAGGCGCTCG GCGCGGTGTT TGGCTACGCC
ATCGGGAACG ATTTGAGCGC GAGGGATCTC CAAATGCGCG CGTCGCAGTG GCTGTACGGC
AAGGCCATCG ACGGCTTCGC GCCGCTCGGC CCGTACATCG CGACGGCCGA CGAGGTGGGA
GATCCGCAGC GCCTGGGCTT ACGGCTCTAT GTAAACGGTG AGTTGCGCCA GAACTCGTCG
ACCGCGGACA TGATCTTCTC GGTGGCGCAG GTGATTGCGG ATTTGTCCCG CATCATGACG
CTTGAGCCGG GCGATCTCGT CTACACCGGC ACGCCGGAGG GCGTGATCCT GGGCCGGGAG
AAGAAGGTGT GGCTCAAGCC GGGGGACGAG ATGGCGTGCG AAATTGATGG GCTCGGGCGG
CTCGAGAACC GGCTTGTGGC GGGCTGA
 
Protein sequence
MKLCTYREGS ALRLGLVRGD EVVDVAASAA QLRISVPETM EAVIAEYTHV RRALEAIEEK 
GVPAGKLSDL RLAPPVTRPQ KILCVGLNYR KHAEESKMPI PSSPVYFAKF ANSLAAHGDE
IAIPEVAREV DYEVELVAVI GRRCRNVSEE EALGAVFGYA IGNDLSARDL QMRASQWLYG
KAIDGFAPLG PYIATADEVG DPQRLGLRLY VNGELRQNSS TADMIFSVAQ VIADLSRIMT
LEPGDLVYTG TPEGVILGRE KKVWLKPGDE MACEIDGLGR LENRLVAG