| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2573 |
|---|
| Symbol | |
|---|
| ID | 8426104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | - |
|---|
| Start bp | 2655024 |
|---|
| End bp | 2655689 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645028691 |
|---|
| Product | two component transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_003185966 |
|---|
| Protein GI | 258512532 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0970392 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAACG AGCTGCCCAT TCGCGTCGCG ATTGCGGACG ACAATGCGGA GTACCGCCTG
ACCTTGGCGG ATTTGTTGGC GTATGAGCCG GATATCGAGG TCGTGGCCGT GTGGGCGAAC
GGCCACGAGG TGTTGCGCGA CGTCGAGCAA GTGCGCCCGG ATGTGCTGCT GCTCGACATC
ACGATGCCCG AGGTCGATGG CCTCTGCGTG CTGAAGGCCG TGCCGCTCCT CGCGTGGCGG
CCGAAAATCG TGGTGTTGAC CATGCATGAG CAGTCGCCGG TCGTGCTCGA GGCGGTCCGG
GCGGGCGTGA GCGGCTACAT TGTCAAGGAC GCGCCGATGG AGGACCTGCT GCGGGCCATC
CGCGAGGCGC ACGAGGGCCG CGCCATGGTG CATCCGCAGG TGATGCGCGC GGTGCTCGGC
GAGATCGAGC GGTACGCGAA GCCGAGCGAC GGATGGAAGG ATCTCTTGAC CGCGCGCGAG
TTCGACGTGC TGTGCCAGAT GGCCGCGGGC AAGTCGAACG AGCAGATCGC GGAGTCGCTC
CACATCACGC TGAAGACAGC GAAAAACCAC GTGTCGCACA TTCTGGCGAA GCTGAACGTG
TCGGACAGGA GCCAAGCGGT GCTGCACGCG TACAGGGAGC GGTGGATCCT GCCGGATCGC
CTCTGA
|
|---|
| Protein sequence | MTNELPIRVA IADDNAEYRL TLADLLAYEP DIEVVAVWAN GHEVLRDVEQ VRPDVLLLDI
TMPEVDGLCV LKAVPLLAWR PKIVVLTMHE QSPVVLEAVR AGVSGYIVKD APMEDLLRAI
REAHEGRAMV HPQVMRAVLG EIERYAKPSD GWKDLLTARE FDVLCQMAAG KSNEQIAESL
HITLKTAKNH VSHILAKLNV SDRSQAVLHA YRERWILPDR L
|
|---|
| |