Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_2474 |
Symbol | |
ID | 8426003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | - |
Start bp | 2542133 |
End bp | 2544244 |
Gene Length | 2112 bp |
Protein Length | 703 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 645028592 |
Product | extracellular solute-binding protein family 5 |
Protein accession | YP_003185869 |
Protein GI | 258512435 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCCAAGC GGAAACTCAG AAAGTGGCAT GTGCCGGTCG CGGTGCTCGT GGCGAGCGGA GGCTTGGTGG GATGCGCCAC GTCGACTCAG AATCACAGCA CAGCCTCTAA CAGCGGTGCG GCTTCGGCGG TTCCCGTGCG AGCGGCTGGA TCCGGCAATG GAACGGTGAC CATCACGTAT CCTTCTCCGC CGGGCATCTC ATCGCTCGAT CCGTCCCAGT GGGCGGCGCA GATCCTGGTG GACCAGGGCA CGATTCTGGA AGGACTCTAC GGATACAATC AACAAAATCA GATTGTGCCG AAGATTGCGT CGGGCTATTC TCTTTCTAAG GACGGACTCA CCTGGACCAT CTACCTGCGC CACGACGCGC GCTGGTCCAA CGGGGATCCG GTTACGGCGC AAGACTTCTA TTACGCGTGG ATGCGCCAGT TGAACCCGGC CAACTCGCAG GCTCAGCTGT GGGCGAGCGT GCTCAACAAC GTGAAGAACG CTTATCAGTA CCACTCGGGC GCAGTGCCGG CGAGCCAAGT GGGTATCAAG GTCATCAATA ATTATGAGTT GCAGATCACG ACCACGACGC CGCACTACAT CCTGGGCGAG CTGGCGGTGT CCGCGTCGAT GCCGCTGGAT CCCAAGGTGG TCAATGCGCA CCCGACGAAC TGGTATCTGC CGCAGTACTT CGTGGGCGAC GGGCCGTACA TTGTGAAATC GTTTACGCCG AACGGGACCA TCACGCTGGT GCCCAACCCG AAATACGTGG GCCATCCCGG CGAGGTCAAC CACGGGAACG CGAAGGTCAT CAACCTGGTG CCGGGCACCA CGGTCGCCGT GGAGGATTAC ATGGCGGGCA AGCTGGACGT GGCGCTCGTC GGATCGCCGT CGGATCTGCA GTATATCAAG ACGCACAATT TGAACAGCCA GCTCCACGTC GCACCGGATT ACAGTATCGA ATACCTCGAG TGGGACCATT CCGCCGTTCC GTCGCCGTAT TACAACACCA AGGTGCGACA GGCCATCGCC ATGGCCATCG AGCGCCAGCC CATCGTCCAG GACGTGTTGG ACGGGATGGG CGGCGTGACC AACACGTTCT CGACGCCGGG CTGGCCGGCC GCCAAGTACG AAAAGGGGTT GCCTGAGAAC ATAGCCGAAG CGAAGAAGCT CCTGGCGGAA GCCGGTTACC CGAACGGCAA GGGGCTGCCC GTCCTGTACC TGTACGCGCC GGTGCCGGAC GTGAACCAAC AGGGCGTGCC GGTCGCCGAG GCCATCTCCC AGGAGCTGCA ACAGAACCTC GGCATCCAGA CCAAGATAGT CCAGGAGAAT CAGACGGACT ACAGCGCGCT GGTCTGGGAG GGTCCGCTCA AGGGCATCCA ACCCGGATTC GTCGTCGCGG CGGGCGCCGT GAACTGGTTC GAGCCGGCCA ACATGGACAT CCAGGCGAGT CAGGGCATCT ACTTCCCAGG CGACTACGGT TGGACGCCGC AACAGGTGCA GCACGTGCTG CCGTGGTACA ACACGCCGTA CGATCCGGCG TCTGTCGCCA AGTACGGCAA CCCGCAGGAT CCGAACACTG GCGTGAGCTG GAACGACTGG ATCCCGCTGC AGAAGGAAGT GCAGAAGGAC ATCGCCATCA TCACCAAGTG GACGAAGGAG CAACCCGCGC AGTGGCAGGC CATCCTGAGC CCGCCGGGGA CCCCGTCGCT CCAGCAACAG TGGAACCAGA TTGTGCAGCA GTGGAAGAGC GCCAAGACGG CGAGCGCCAA GCACGCGGCG TTTGTCCTCG CGTGGGAGTT CGTGGCGCCG GAGTCCGCGA CCACGACGCT TGGCGGCACG AACACGGGTG CGCTCGACGT GCAGGCATGG TGGGATACGA ACGAGTCCGA GCAGGAGCGC GAGTGGCGGA TGTGGCAGGC CTACGAGCAG AACAGCATGA CGTCGTCTCA GGCGGCGGTG TGGGCCGGCA AGCTCGTCAC GTCGCTTGAG CAGCAGGCCT GGGTCATCCC GCTTTACTAC AACGAGACGT TCTACCTGGA GAAGCCGTGG GTGACCGGCG CGCAGCCCAA CCCGTGGGCG TGGGGCAACT TCTATCAGTT CCAGTATCTG TCCACCAAGT GA
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Protein sequence | MAKRKLRKWH VPVAVLVASG GLVGCATSTQ NHSTASNSGA ASAVPVRAAG SGNGTVTITY PSPPGISSLD PSQWAAQILV DQGTILEGLY GYNQQNQIVP KIASGYSLSK DGLTWTIYLR HDARWSNGDP VTAQDFYYAW MRQLNPANSQ AQLWASVLNN VKNAYQYHSG AVPASQVGIK VINNYELQIT TTTPHYILGE LAVSASMPLD PKVVNAHPTN WYLPQYFVGD GPYIVKSFTP NGTITLVPNP KYVGHPGEVN HGNAKVINLV PGTTVAVEDY MAGKLDVALV GSPSDLQYIK THNLNSQLHV APDYSIEYLE WDHSAVPSPY YNTKVRQAIA MAIERQPIVQ DVLDGMGGVT NTFSTPGWPA AKYEKGLPEN IAEAKKLLAE AGYPNGKGLP VLYLYAPVPD VNQQGVPVAE AISQELQQNL GIQTKIVQEN QTDYSALVWE GPLKGIQPGF VVAAGAVNWF EPANMDIQAS QGIYFPGDYG WTPQQVQHVL PWYNTPYDPA SVAKYGNPQD PNTGVSWNDW IPLQKEVQKD IAIITKWTKE QPAQWQAILS PPGTPSLQQQ WNQIVQQWKS AKTASAKHAA FVLAWEFVAP ESATTTLGGT NTGALDVQAW WDTNESEQER EWRMWQAYEQ NSMTSSQAAV WAGKLVTSLE QQAWVIPLYY NETFYLEKPW VTGAQPNPWA WGNFYQFQYL STK
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