Gene Aaci_2474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2474 
Symbol 
ID8426003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp2542133 
End bp2544244 
Gene Length2112 bp 
Protein Length703 aa 
Translation table11 
GC content62% 
IMG OID645028592 
Productextracellular solute-binding protein family 5 
Protein accessionYP_003185869 
Protein GI258512435 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4166] ABC-type oligopeptide transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCAAGC GGAAACTCAG AAAGTGGCAT GTGCCGGTCG CGGTGCTCGT GGCGAGCGGA 
GGCTTGGTGG GATGCGCCAC GTCGACTCAG AATCACAGCA CAGCCTCTAA CAGCGGTGCG
GCTTCGGCGG TTCCCGTGCG AGCGGCTGGA TCCGGCAATG GAACGGTGAC CATCACGTAT
CCTTCTCCGC CGGGCATCTC ATCGCTCGAT CCGTCCCAGT GGGCGGCGCA GATCCTGGTG
GACCAGGGCA CGATTCTGGA AGGACTCTAC GGATACAATC AACAAAATCA GATTGTGCCG
AAGATTGCGT CGGGCTATTC TCTTTCTAAG GACGGACTCA CCTGGACCAT CTACCTGCGC
CACGACGCGC GCTGGTCCAA CGGGGATCCG GTTACGGCGC AAGACTTCTA TTACGCGTGG
ATGCGCCAGT TGAACCCGGC CAACTCGCAG GCTCAGCTGT GGGCGAGCGT GCTCAACAAC
GTGAAGAACG CTTATCAGTA CCACTCGGGC GCAGTGCCGG CGAGCCAAGT GGGTATCAAG
GTCATCAATA ATTATGAGTT GCAGATCACG ACCACGACGC CGCACTACAT CCTGGGCGAG
CTGGCGGTGT CCGCGTCGAT GCCGCTGGAT CCCAAGGTGG TCAATGCGCA CCCGACGAAC
TGGTATCTGC CGCAGTACTT CGTGGGCGAC GGGCCGTACA TTGTGAAATC GTTTACGCCG
AACGGGACCA TCACGCTGGT GCCCAACCCG AAATACGTGG GCCATCCCGG CGAGGTCAAC
CACGGGAACG CGAAGGTCAT CAACCTGGTG CCGGGCACCA CGGTCGCCGT GGAGGATTAC
ATGGCGGGCA AGCTGGACGT GGCGCTCGTC GGATCGCCGT CGGATCTGCA GTATATCAAG
ACGCACAATT TGAACAGCCA GCTCCACGTC GCACCGGATT ACAGTATCGA ATACCTCGAG
TGGGACCATT CCGCCGTTCC GTCGCCGTAT TACAACACCA AGGTGCGACA GGCCATCGCC
ATGGCCATCG AGCGCCAGCC CATCGTCCAG GACGTGTTGG ACGGGATGGG CGGCGTGACC
AACACGTTCT CGACGCCGGG CTGGCCGGCC GCCAAGTACG AAAAGGGGTT GCCTGAGAAC
ATAGCCGAAG CGAAGAAGCT CCTGGCGGAA GCCGGTTACC CGAACGGCAA GGGGCTGCCC
GTCCTGTACC TGTACGCGCC GGTGCCGGAC GTGAACCAAC AGGGCGTGCC GGTCGCCGAG
GCCATCTCCC AGGAGCTGCA ACAGAACCTC GGCATCCAGA CCAAGATAGT CCAGGAGAAT
CAGACGGACT ACAGCGCGCT GGTCTGGGAG GGTCCGCTCA AGGGCATCCA ACCCGGATTC
GTCGTCGCGG CGGGCGCCGT GAACTGGTTC GAGCCGGCCA ACATGGACAT CCAGGCGAGT
CAGGGCATCT ACTTCCCAGG CGACTACGGT TGGACGCCGC AACAGGTGCA GCACGTGCTG
CCGTGGTACA ACACGCCGTA CGATCCGGCG TCTGTCGCCA AGTACGGCAA CCCGCAGGAT
CCGAACACTG GCGTGAGCTG GAACGACTGG ATCCCGCTGC AGAAGGAAGT GCAGAAGGAC
ATCGCCATCA TCACCAAGTG GACGAAGGAG CAACCCGCGC AGTGGCAGGC CATCCTGAGC
CCGCCGGGGA CCCCGTCGCT CCAGCAACAG TGGAACCAGA TTGTGCAGCA GTGGAAGAGC
GCCAAGACGG CGAGCGCCAA GCACGCGGCG TTTGTCCTCG CGTGGGAGTT CGTGGCGCCG
GAGTCCGCGA CCACGACGCT TGGCGGCACG AACACGGGTG CGCTCGACGT GCAGGCATGG
TGGGATACGA ACGAGTCCGA GCAGGAGCGC GAGTGGCGGA TGTGGCAGGC CTACGAGCAG
AACAGCATGA CGTCGTCTCA GGCGGCGGTG TGGGCCGGCA AGCTCGTCAC GTCGCTTGAG
CAGCAGGCCT GGGTCATCCC GCTTTACTAC AACGAGACGT TCTACCTGGA GAAGCCGTGG
GTGACCGGCG CGCAGCCCAA CCCGTGGGCG TGGGGCAACT TCTATCAGTT CCAGTATCTG
TCCACCAAGT GA
 
Protein sequence
MAKRKLRKWH VPVAVLVASG GLVGCATSTQ NHSTASNSGA ASAVPVRAAG SGNGTVTITY 
PSPPGISSLD PSQWAAQILV DQGTILEGLY GYNQQNQIVP KIASGYSLSK DGLTWTIYLR
HDARWSNGDP VTAQDFYYAW MRQLNPANSQ AQLWASVLNN VKNAYQYHSG AVPASQVGIK
VINNYELQIT TTTPHYILGE LAVSASMPLD PKVVNAHPTN WYLPQYFVGD GPYIVKSFTP
NGTITLVPNP KYVGHPGEVN HGNAKVINLV PGTTVAVEDY MAGKLDVALV GSPSDLQYIK
THNLNSQLHV APDYSIEYLE WDHSAVPSPY YNTKVRQAIA MAIERQPIVQ DVLDGMGGVT
NTFSTPGWPA AKYEKGLPEN IAEAKKLLAE AGYPNGKGLP VLYLYAPVPD VNQQGVPVAE
AISQELQQNL GIQTKIVQEN QTDYSALVWE GPLKGIQPGF VVAAGAVNWF EPANMDIQAS
QGIYFPGDYG WTPQQVQHVL PWYNTPYDPA SVAKYGNPQD PNTGVSWNDW IPLQKEVQKD
IAIITKWTKE QPAQWQAILS PPGTPSLQQQ WNQIVQQWKS AKTASAKHAA FVLAWEFVAP
ESATTTLGGT NTGALDVQAW WDTNESEQER EWRMWQAYEQ NSMTSSQAAV WAGKLVTSLE
QQAWVIPLYY NETFYLEKPW VTGAQPNPWA WGNFYQFQYL STK