| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2302 |
|---|
| Symbol | |
|---|
| ID | 8425830 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | + |
|---|
| Start bp | 2365498 |
|---|
| End bp | 2366712 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 645028422 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003185700 |
|---|
| Protein GI | 258512266 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCATGACA CACACCTCGC ATGGAAAGGA TGGCGCCCGG TGGGCAACCG TATCGCTCTG
TTTTACGCCG TGACGGCGCT GTACTGGTTT TCGACCTACA CGTACGTTCC GCTCCTGTCG
CCGTACGTCG TTGCCATCGG GGGCTCACTC AGCATGGCGG GCATGGTGGT GGGATCCTAT
GGCTTCTCGC AGATGCTCGT GCGGGTGCCT ATCGGGGTGT GGTCCGACAA GGTCCGAAGC
CGCAAGCCGT TCGTCGTCGC GGGCGGCGCC GTCGGCATGC TGTCGAGCCT GGGCTTCGCC
GTCACGCACT CCGTCCTGTG GGCGCTCGTG TTCCGCCTCC TCGCCGGCAT CGCGGCCGGC
TGCTGGGTGG TCTTCACCGT GCTCTACGCG AGCTACCACC AGCCCGACGA GGCTCCGAAG
GCAATGGGCG TCCTCAGCTT CTACACATCC ATCGGGCAGC TCGCGGCCTC GACGCTGGGC
GGCGTAATCG CAGAACGATA CGGTTGGCAC GCGGCCTTCT GGCTGGGCGC CGCCGGTGGA
CTCGCGGCCA CACTCCTCGC CTGTTTCGTC GTCGACAAGC CTCCCGCGCG CGATCACGGC
GGTATCCGCG TCGCCGAGAT GCTCACGGTC GGGCGGGATC GCATTGTGCT CGGCGTGTCG
TTCCTCGCGG TCCTCGCACA GGTCGTCACC TTCACCACGA TGTTCGGCTT CACGCCGGAG
CAGGCGACGC ACCTCGGGGC GAACAAGGCC GATCTCAGCT GGCTTACCCT CGCGGCCACG
CTCCCGAACG CCATCGCGTC GTATTTCAGC GGCAGCCTGT TCTCGCGCTG GATGGGCGAG
CGGAACGTGG TGGCGAGCGG ATTTGCCATC GCGGCGCTGT TCACCGCGGC CATCCCGCTC
TGCCACGCCC TTCCGCTCCT GTATGCAACC CAGGCCGTGA ACGGCTTTGG CCAAGGGCTC
TGCATGCCCG TGCTCATGGG CCTCGCCATC CGCCACATCG ACGCGAGCCG CCGAGCCACG
GCGATGGGCT TTTATCAGGC CATCTACGCC GTCGGCATGT TTGGCGGGCC CGCGGTCGTC
GGCTGGCTGG GCGATCACGT CGGCCTGAGC CGCGGGTTCC TCGCCGTCGC CGCGACGAGT
GTGGTCGCCT GCGCCCTCAC GTTCGCGCTT GCGCCCGGGC GCGCGGCACG TCAGGTGGTC
ACGCGCTCCA GCTGA
|
|---|
| Protein sequence | MHDTHLAWKG WRPVGNRIAL FYAVTALYWF STYTYVPLLS PYVVAIGGSL SMAGMVVGSY
GFSQMLVRVP IGVWSDKVRS RKPFVVAGGA VGMLSSLGFA VTHSVLWALV FRLLAGIAAG
CWVVFTVLYA SYHQPDEAPK AMGVLSFYTS IGQLAASTLG GVIAERYGWH AAFWLGAAGG
LAATLLACFV VDKPPARDHG GIRVAEMLTV GRDRIVLGVS FLAVLAQVVT FTTMFGFTPE
QATHLGANKA DLSWLTLAAT LPNAIASYFS GSLFSRWMGE RNVVASGFAI AALFTAAIPL
CHALPLLYAT QAVNGFGQGL CMPVLMGLAI RHIDASRRAT AMGFYQAIYA VGMFGGPAVV
GWLGDHVGLS RGFLAVAATS VVACALTFAL APGRAARQVV TRSS
|
|---|
| |