| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_2141 |
|---|
| Symbol | |
|---|
| ID | 8425663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | - |
|---|
| Start bp | 2201411 |
|---|
| End bp | 2202835 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 645028255 |
|---|
| Product | Malate dehydrogenase (oxaloacetate- decarboxylating) |
|---|
| Protein accession | YP_003185539 |
|---|
| Protein GI | 258512105 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0281] Malic enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTTTC AGCGGAGTGG CATCAGTCTG ATTTATCGAC TGGAGATCGC CAATAAGGGC
AACACGTTTG CGAAGGTGGC GAGCCTGGTC GGGAACGCTG GAGGCGATAT TGCTGCGGTC
GACGTGATCC GCGTGACGCA GGACGTGGTG GTGCGAGACG TGACCATCAA CGTGGCGAAT
CGCGAGCATG GCCGCCAGAT CGCCGAGTTG CTCGACGCGG AGCCGGGGAT CCACGTGGTG
GCGGTGTCCG ACCGGACCTT CCTCGTTCAC TTGGGCGGCA AGCTCGAAGT TGTGCCGAAG
ATCCAGGTGA AGAACCGCGA GGATCTTTCG CGCGTGTACA CGCCGCACGT GGCGCGCGTG
TGCGAGGCGA TTCACGAGGA CCCGTCCAAG GCGTTCCAAC TGACCATCAA GCGCAACACG
GTGGCCGTGG TCTCGGACGG CACGGCGGTG TTGGGCCTCG GGGACATCGG CCCGTACGCG
GCGATGCCGG TCATGGAAGG CAAGGCCATG CTGTTCAAAC AGTTCGCAGG CGTGGACGCG
TTCCCCATCT GCCTCGACAC GAAGGATCCG GACGAGATCG TCGAGACGGT GAAGCGCATC
GCGCCGGCGT TTGGCGGCAT CAATCTGGAG GATATCTCGT CTCCGAGATG CTTCTATATC
GAGGAGCGGC TGAAGCAGGA GCTCGACATC CCTGTCTTCC ACGACGACCA ACACGGGACG
GCGGTCGTCA TGCTGGCCGG CCTGATGAAC GCGGCGAAGC TCGTCGGGAA GAAGCTTCAG
GACCTCAAGG TCGTGATCGT CGGCATCGGC GCTGCGGGCG TGGCCTGCAC GAAAATGCTC
TTGTCCGCCG GTGTGAAAAA CATCATCGGC GTCACGCTGG AGGGCATCCT GCACCGCGGC
AAGCAGTACG ACAACGAGAT CTGGAATTGG TACAAGGAGC ACACGAATCC GGACAACATC
ACGGGCACGC TGGACGACGC CATCGTGGGC GCGGACGTGT TCATCGGCGT GTCGGGACCT
GGCGTGCTGA CGGTCGATCA CATCAAGAAG ATGGCGCCCG ATCCGATTGT CTTCGCGATG
GCCAACCCGA CGCCGGAGAT CGAGCCGGAA CTGGCGGCTC CCCATGTGCG CGTGCTCGCC
ACCGGTCGAT CCGACTACCC GAACCAGATC AACAACCTCC TCTGTTTCCC GGGCATGTTC
AAGGGGGCGC TGGCGGCGCG CGCGTCGACC ATCAACGAGG AGATGAAGCT CGCGGCTGCG
CAGGCCATTG CTTCCATCAT CCGTGAGAAC GAGTTGCGCG AGGACTACAT TATTCCGTCT
GTCTTTAACC AAGCGGTTGT TCAGCGAGTC GCGGACGCGG TCGCCGATGC CGCCCGCCGA
ACGGGCGTGG CGCGCCGCGA AGTGATGCCG AAGGACAACT ATTGA
|
|---|
| Protein sequence | MEFQRSGISL IYRLEIANKG NTFAKVASLV GNAGGDIAAV DVIRVTQDVV VRDVTINVAN
REHGRQIAEL LDAEPGIHVV AVSDRTFLVH LGGKLEVVPK IQVKNREDLS RVYTPHVARV
CEAIHEDPSK AFQLTIKRNT VAVVSDGTAV LGLGDIGPYA AMPVMEGKAM LFKQFAGVDA
FPICLDTKDP DEIVETVKRI APAFGGINLE DISSPRCFYI EERLKQELDI PVFHDDQHGT
AVVMLAGLMN AAKLVGKKLQ DLKVVIVGIG AAGVACTKML LSAGVKNIIG VTLEGILHRG
KQYDNEIWNW YKEHTNPDNI TGTLDDAIVG ADVFIGVSGP GVLTVDHIKK MAPDPIVFAM
ANPTPEIEPE LAAPHVRVLA TGRSDYPNQI NNLLCFPGMF KGALAARAST INEEMKLAAA
QAIASIIREN ELREDYIIPS VFNQAVVQRV ADAVADAARR TGVARREVMP KDNY
|
|---|
| |