| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_1970 |
|---|
| Symbol | |
|---|
| ID | 8425491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | - |
|---|
| Start bp | 2018334 |
|---|
| End bp | 2019008 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 645028086 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_003185371 |
|---|
| Protein GI | 258511937 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATTC TCCTCGTTGA AGACGACCGG GGCCTGAGTG ATGCACTCGC GGAACTCCTA
CGAGAGGAGT CGTTCCAGGT CGATGTGGCG CATGACGGCG AGGAGGGTCT TTACCTCGCG
GAGACCGCGG TGTACGACGC GCTCGTGGTC GACGTCATGC TGCCCGGCCT GTCGGGTTAC
GATCTCGTCC GCACCTTGAG GGACAAGCGC GTGCACGTGC CCGTTCTATT CCTCACGGCC
CTGGGCGACG TCGATCACCG CGTTCAGGGG CTCAACGCCG GCGGGGATGA CTACCTGCCG
AAGCCGTTCG CCACCGAGGA GTTTCTTGCC CGGCTGCGCG CCCTGTTGCG CCGCAACCGG
GAATTGGGGA CGGACATGAC GCTGCGGTCA GGTCTCCTCG TCTTGGATCC GCTCGCCCGA
CGTGCGGCGT TTGGAAATGA GCCCATCAAG CTCAGCGACA AGGAATTCGA TCTGCTCGAA
TACCTGCTCA GCCACCGCGG ACAGATTCTC ATGCGCGAAC GGATCTTCAA TCGCGTATGG
GGAATCGATT CCGACGTGAT GGACACGACC GTGGACCTGT ACGTCCATTA CCTGCGAAAG
AAGCTTCAGC CGTTCGGCTA CGATACCGCC ATTCGCACGG TCCGCAACGT CGGATACATG
TGGAGTGATC CGTGA
|
|---|
| Protein sequence | MRILLVEDDR GLSDALAELL REESFQVDVA HDGEEGLYLA ETAVYDALVV DVMLPGLSGY
DLVRTLRDKR VHVPVLFLTA LGDVDHRVQG LNAGGDDYLP KPFATEEFLA RLRALLRRNR
ELGTDMTLRS GLLVLDPLAR RAAFGNEPIK LSDKEFDLLE YLLSHRGQIL MRERIFNRVW
GIDSDVMDTT VDLYVHYLRK KLQPFGYDTA IRTVRNVGYM WSDP
|
|---|
| |