Gene Aaci_1856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1856 
Symbol 
ID8425373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp1905323 
End bp1906189 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content67% 
IMG OID645027968 
ProductRadical SAM domain protein 
Protein accessionYP_003185257 
Protein GI258511823 
COG category[L] Replication, recombination and repair 
COG ID[COG1533] DNA repair photolyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.587316 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGGAT TGGGCCACTC GCCAAGCCGC CTGCTGACGC CAACCGGCGG CTATCTGCGC 
GGCTACGATT ACACGTTGAA TCCGTACATC GGCTGTGCCT ACGGGTGCAA GTACTGCTAC
GTGCAGGCGT TGCCTGTGGC GCGCTTTCGC AGCGAACCCT GGGGCTCCTA CGCCGAAGCC
AAACGGATCG ACCCGGAAGA TTTGCTTCGA GAACTGCGCG GGGCGAGGCG GCGCGGAGGG
ACTCGCATCT TCATGTCCTC CAGCACGGAT CCGTATCAGC CGGCGGAGTG GCGCGTCGGC
GCGACGCGTT CCATCCTGCT GACCTTGCAA TCGGAGCCCG AACTCGTGGA TTTTCTGTTC
GTGCAGACGC GCTCACCGCT CGTCGCCCGG GACGCCGAGA TCCTCGCATC CCTGCGCCAT
CGCGTGCTCG TCTCCGTGAC CCTTGAGACG GATCGGGAGG ATGTCCGTCG CCGATTCACG
CCCCGCGCCC CGACCGTGCG GGCGCGCATC CGGGCCATCG AGGCCCTTCG CGCGCATGCG
ATCCCTGTGC AGGTAGCCGT GGCACCCATC TTGCCGTCTT CGCCCGACTT CCCGCGGCTC
CTCGCCGCGC TCTCGGATTT CGTCGCCATC GACGACTGGT TTATCGGAGA CGGCGCGAAT
GGGCGGCGGA GCCGCGCGCT GGGCGTCGAA CAGTGGTACC TGCCCGACGA GCGGGACGCG
TGGTACCGAC CGGGACAGGC GCGGGACTTT GCCGAGCTGC TCGCGGAAAG GATGCCCCGA
GACCGCATCT TTCTCCACCA ACAGGGGTTC CTGCCGCTCG ACGTGCGGCG GCCCTTTGAC
GAAAGGATCG ATCCGGAGCA TGCGTGA
 
Protein sequence
MTGLGHSPSR LLTPTGGYLR GYDYTLNPYI GCAYGCKYCY VQALPVARFR SEPWGSYAEA 
KRIDPEDLLR ELRGARRRGG TRIFMSSSTD PYQPAEWRVG ATRSILLTLQ SEPELVDFLF
VQTRSPLVAR DAEILASLRH RVLVSVTLET DREDVRRRFT PRAPTVRARI RAIEALRAHA
IPVQVAVAPI LPSSPDFPRL LAALSDFVAI DDWFIGDGAN GRRSRALGVE QWYLPDERDA
WYRPGQARDF AELLAERMPR DRIFLHQQGF LPLDVRRPFD ERIDPEHA