Gene Aaci_1648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1648 
Symbol 
ID8425158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp1717916 
End bp1718833 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content67% 
IMG OID645027753 
ProductDNA polymerase LigD, polymerase domain protein 
Protein accessionYP_003185049 
Protein GI258511615 
COG category[L] Replication, recombination and repair 
COG ID[COG3285] Predicted eukaryotic-type DNA primase 
TIGRFAM ID[TIGR02778] DNA polymerase LigD, polymerase domain 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.520924 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGCC ATGAAAGTCC GCCGACGCTC ACCCATGGGG ACAAGATCTA CTTCCCTGCC 
GCGGGGCTCT GCAAGCGCGA CTATATGACC TATCTTGCCC AAATCGGCGA GCACTTGGTC 
CGACATCTGC GCCATCGGCC CGTCACGTTG GTTCGGTGCC CGGACGGCGT GGCCGGCCGC 
CGATTTTATC AGCGGCATCT TCCGCCACAC GCACCTCCGA GCCTGCCGCG CAGAGAGGTC 
CAAGGCGAAC GCCCGTTGAT TGCCATCCCG GACGTCGAGA CGCTCTTATA CTACGGAAAC 
TTGGGCGCCA TCGAGTTCCA CGCGGGTCTG CATCTCGTCC AAGGTCCTCA AGCGGGATGC 
CCGACGGCGC TCACGTTCGA TCTCGACCCT TCCGATCCGC GCGACTTCGA GCGCGTGCGA 
GAGCTCGCGC TGTGCCTGCG CGAGGTGCTT CGCGGCCTCG GCCTCGACGG CGTGGCGAAG 
ACCACGGGGG CGTCCGGCCT GCAGGTGTTG GTCCCGCTTG AGGAGCCGCT CCCGTACGCC 
GTCACGCGGC CGGTGGTCAA CTTCGTCGCG GCGTACTGTG CGTCGCGCTG GCCGGATCTG 
GCCACCACCG AGAGGCGCGT GCGCCATCGG GGCCGCCGGG TGTACGTGGA CGCGCCGCAG 
CACGGGCCGA CGCGCACGCT GATCGCGGCG TACAGCGTGC GCGCGGTGGA GAAAGCGCTG 
GTGTCGGCGC CCATCACATG GGCAGAACTG GAATACGGGG TGTCGCCCGA CGCGTTTGAT 
CTCCACGTGG TGCCTGACAG ATTGGAGCGG GTGGGCGATT GGCTGGAGCT CGCGGCGCGT 
CACCCCGCCT CTCGCGTACG GGCCATCCAC GACGCGCTCC CCCCGCCTTG GCGACAAACG 
CGCGTCCGTT CAGTATAA
 
Protein sequence
MKRHESPPTL THGDKIYFPA AGLCKRDYMT YLAQIGEHLV RHLRHRPVTL VRCPDGVAGR 
RFYQRHLPPH APPSLPRREV QGERPLIAIP DVETLLYYGN LGAIEFHAGL HLVQGPQAGC 
PTALTFDLDP SDPRDFERVR ELALCLREVL RGLGLDGVAK TTGASGLQVL VPLEEPLPYA 
VTRPVVNFVA AYCASRWPDL ATTERRVRHR GRRVYVDAPQ HGPTRTLIAA YSVRAVEKAL 
VSAPITWAEL EYGVSPDAFD LHVVPDRLER VGDWLELAAR HPASRVRAIH DALPPPWRQT 
RVRSV