Gene Aaci_1561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1561 
Symbol 
ID8425071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp1623944 
End bp1625050 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content63% 
IMG OID645027666 
Productspore germination protein 
Protein accessionYP_003184962 
Protein GI258511528 
COG category 
COG ID 
TIGRFAM ID[TIGR00912] spore germination protein (amino acid permease) 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.636005 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTTCAGA TCTCTCGCTA TCAACTCATC CTCATGCTCA TCTGGACCGT GCTTGGCACG 
GGCATCGTCA CCATGCCTGG GACCATCGCC CAATTCACGC TCCGCGACGC ATGGATTTCG 
GGCTTCGGGC TGCTCTTCGG AGCCGTGATG TGCGCGGTCA TTTCGCTGGC GCACGTGCGC 
CTGTTTCCCG GGCGAACCCT CACCCAGGCC GCCATCGACG TGCTCGGCCC CGTGCTTGGC 
CGCGCCTACG GGATCTGGTA CCTCGCGTAC GGCTTTCTCA CCATGGCCAC CATCGGCCGC 
GAGATGAGCG CCTTCATTGG CATCTCCGTG CTGCCGAACA CGCCGGATTT TTTGGTCAGC 
GCCCTTGCGT TTGCGGTATC CATGTACCTC GCGTATCTCG GCATCGAAGT GGTCGCGCGC 
GTGAACGAGT TCATCCTGCC GCTCGCCGCC GTCGTCTCCC CGGTGCTGTT CCTGCTCGCG 
GCTCGACTGT TTGACACGTC GTCCTTTCAG CCGCTCCTCG GCGATCCCGC CAGCGCCGCC 
TGGCGCGCGG CTGTCGTGCC TGCATTCGCT TACGGTCTCG AGTTTGCCAT CGCCCTGCAG 
TGGGTTCCGG CGCTCCGCAG CCCGCGCACG CTGCCGTGGG ACATCGTCAT CGCGGGGGCC 
ATCAGTGCCT TTGTCCTCTC CGCCCTGGTA ACGCTCACGG TGGGCGTCCT CGGCGAACCC 
GCCCGCTATT TGAATTACCC GGTGCTCGAA CTCGTGCGAG CCATCCGACA AGGCAAGTTC 
GTCGAGCGCC TGGACACGCT GTACGTCATG GGCGTGGCCA TCACGCTCGT CCTGAAACTC 
GCAACCTTTC AACTCGCCGT GGGCGAGGCG GTGAAGGACG TGAGCGGATC GCCCGAGCGG 
ACGTGGATCC CCGTCCCCGT GGCCCTTCTG GGGTGGTCGC TGTCGAATTA TTTGTTTCGC 
AACGTGTTTG ACGTCACGAA CTTTATCCTT CGCGATGTCC CCAGCTATTT CCTTGCAACT 
GTCGTACTCC TTCCCGGCGC GCTGTATGCC CTTCGCGCGG TTCAATCGGT CAGAGCCAAG 
AGCCAGCGCG GGCTCCGAAG CACATAA
 
Protein sequence
MVQISRYQLI LMLIWTVLGT GIVTMPGTIA QFTLRDAWIS GFGLLFGAVM CAVISLAHVR 
LFPGRTLTQA AIDVLGPVLG RAYGIWYLAY GFLTMATIGR EMSAFIGISV LPNTPDFLVS 
ALAFAVSMYL AYLGIEVVAR VNEFILPLAA VVSPVLFLLA ARLFDTSSFQ PLLGDPASAA 
WRAAVVPAFA YGLEFAIALQ WVPALRSPRT LPWDIVIAGA ISAFVLSALV TLTVGVLGEP 
ARYLNYPVLE LVRAIRQGKF VERLDTLYVM GVAITLVLKL ATFQLAVGEA VKDVSGSPER 
TWIPVPVALL GWSLSNYLFR NVFDVTNFIL RDVPSYFLAT VVLLPGALYA LRAVQSVRAK 
SQRGLRST