Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_1250 |
Symbol | |
ID | 8424755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | + |
Start bp | 1303823 |
End bp | 1304713 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 645027365 |
Product | 3-hydroxybutyryl-CoA dehydrogenase |
Protein accession | YP_003184668 |
Protein GI | 258511234 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.274535 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGGTTTC GGAACATCAC GGTCGCGGGC GGCGGCGTAT TAGGGAGCCA AATCGCGTAC CAAACGGCGT TCCATGGTTT TCCGGTCGTC ATCTACGACA TCTCGGACGA GGCACTCGCC AAGGTGCGAG ATCGCCTCGA GAAGCTCAAA CCGAACTACA TGCGGGATCT CGGCGCCTCG CAGGAGCAGG TGGATGCGGC CATGGACAGG ATACGCCTGA CGGCTCATCT CGCCGACGCC GTGCGCGAGG CGGATCTGGT CATTGAGGCG GTGCCCGAGA TTCCGGAGGT CAAGCGGGAG TTTTACGAAC GGCTGGCAAA CGTCGCGCCG TCGCACACGG TGTTCGCCAC CAATTCTTCG ACGCTTCTCC CGAGCCAATT CGCGGAGGCC ACGGGGCGGC CGGAGAAGTT TCTTGCGCTG CACTTCGCCA ATTCCATTTG GCGGCACAAC ACGGCGGAGG TCATGCGCCA TCCGGGAACC GACGAGCAGG TGTTTGAGGA CGTGATCGAG TTTGCGCGGG CCATCGGGAT GGTGCCGCTG CCGCTGCGCA AAGAGCAGCC GGGCTACATT CTGAATTCGC TGCTCGTTCC TTTTCTGGAG GCGGCCCAGA TGTTGTGGGT GAACGAGGTG GCGGATCCCG AGACCATCGA CAAGACGTGG ATGATTGCGA CGGGCGCGAA GGAGGGGCCG TTCGCCATCC TGGACACGGT GGGGATACGG ACCGCGTACA ACATCGCGTC CGGCAAGGCG AAGGCGCGGA ACGAGGAGTA CGCGAAGCTC GCGGAGAAGC TCAAGGCGAT GATCGACCAG GGGAAGCTCG GCCGCGAGTC CGGGGAGGGT TTCTATCGCT ATCCGAATCC CCGGTTCAAA CAACCCGACT TTCTCCGCTG A
|
Protein sequence | MRFRNITVAG GGVLGSQIAY QTAFHGFPVV IYDISDEALA KVRDRLEKLK PNYMRDLGAS QEQVDAAMDR IRLTAHLADA VREADLVIEA VPEIPEVKRE FYERLANVAP SHTVFATNSS TLLPSQFAEA TGRPEKFLAL HFANSIWRHN TAEVMRHPGT DEQVFEDVIE FARAIGMVPL PLRKEQPGYI LNSLLVPFLE AAQMLWVNEV ADPETIDKTW MIATGAKEGP FAILDTVGIR TAYNIASGKA KARNEEYAKL AEKLKAMIDQ GKLGRESGEG FYRYPNPRFK QPDFLR
|
| |