Gene Aaci_1039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1039 
Symbol 
ID8424531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp1107590 
End bp1109044 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content63% 
IMG OID645027150 
ProductOrn/Lys/Arg decarboxylase major region 
Protein accessionYP_003184466 
Protein GI258511032 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1982] Arginine/lysine/ornithine decarboxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATCAGA ATGAGACCCC GTTGTTCGAT GCACTGTTGC GACACGTGGC GCGCAACCCG 
CGCCAGTTTC ACATTCCAGG GCACAAGAAG GGCCGCGGCA TGGACAGCCG CTTTCGCGCG
TTCGTCGGGG ACAATGCGCT TGCGCTTGAT CTCATCAACA TCGCGCCGCT CGACGACCTC
CACCATCCGA CGGGGGCCAT CAAGCACGCG CAGGAACTCG CAGCGGAGGC GTTCGGGGCC
GATTACACGT TTTTTTCTGT CCAAGGGACG TCCACGGCCA TCATGACGAT GGTCATGGCG
ACCGTGGGCC CCGGGGACAA GATCCTCGTT CCGCGCAATG TGCATAAGTC CGTGCTGACG
GCCCTCATCC TGGCGGACGC CAAGCCGGTC TTTCTTCACC CGGAGGTCGA CCGCGAGTTC
GGCATCTCGC ACGGACTTTC TGTTGAAACC GTGTCGCGCG CGCTCGAGGA GCACCCCGAC
GCGCGCGCCC TTGTCGTGAT CAACCCGACC TATTTCGGCA TTGCGGCCGA CCTCGAGCGC
ATTGTTGAGG TGGCGCACAG CGTCGGCGTG CCCGTGCTCG TGGACGAGGC GCACGGCGTG
CACATCGGTT TTCATCCCGA TCTGCCGTTG TCCGCCATGC AGGCGGGCGC TGACATGGCG
GCCACCAGCG TGCACAAGCT CGGCGGATCC ATGACCGGTT CGAGTGTCTT GAACGTGCGC
GAAGGGATGA TCGACCCTCG GCACGTTCAG GTGGTGTTGA GCATGTTGAC GACCACGTCG
ACCTCGTATC TCTTGCTCGC TTCACTCGAC GTGGCGCGCA AGGAGTTGGC CATTCACGGG
CGCGAGCGGC TGGATTACGC CATTTCCCTC GCCAACAAGG CGCGGCGGGC GATTCAGGCC
ATTCCTGGAC TGCGGTGCCT CGACGAGCGC CAGCTCGTCT CCAGTGCCAC CTACGCGCTC
GATCCGACCA AGTTGACCAT CTCCGTGCGC GATCTCGGCC TCACTGGATA CGACGTGGAG
CGCATCCTGC GCGAAGAGTA CAACATCGAG GTCGAGCTGA GCGATCTGTA CAACATCTTG
TGTATCATCT CGTGGGGCGA CACGGAGGAG GATATCGAGG CGCTCATCCA GGCACTCGAG
GCCATCGCGG ATCGCTACGG CCAGGGCGCG GTGCGCGAGC ACCAGCCCGT CACGCTGCCC
TCGATGCCCG AGCTGCGGAT GACGCCGCGT TCCGCGTTCT ACGCGCCGAC GGAGGTCGTG
CCGCTGCAGC AAGCCGTGGG GCGGACCATG GCGGAGATGG TCATGGTGTA TCCGCCCGGC
ATTCCCATCC TCTTGCCTGG CGAAGTGATC ACGCAGGATA ATATCGACTA TATCGAAGCC
AATCTGCGGG CCGGACTGCC CGTGCAGGGC CCTGACGACC CCGAGATCCG GATGATCAAA
GTCGTCCGCG AGTGA
 
Protein sequence
MNQNETPLFD ALLRHVARNP RQFHIPGHKK GRGMDSRFRA FVGDNALALD LINIAPLDDL 
HHPTGAIKHA QELAAEAFGA DYTFFSVQGT STAIMTMVMA TVGPGDKILV PRNVHKSVLT
ALILADAKPV FLHPEVDREF GISHGLSVET VSRALEEHPD ARALVVINPT YFGIAADLER
IVEVAHSVGV PVLVDEAHGV HIGFHPDLPL SAMQAGADMA ATSVHKLGGS MTGSSVLNVR
EGMIDPRHVQ VVLSMLTTTS TSYLLLASLD VARKELAIHG RERLDYAISL ANKARRAIQA
IPGLRCLDER QLVSSATYAL DPTKLTISVR DLGLTGYDVE RILREEYNIE VELSDLYNIL
CIISWGDTEE DIEALIQALE AIADRYGQGA VREHQPVTLP SMPELRMTPR SAFYAPTEVV
PLQQAVGRTM AEMVMVYPPG IPILLPGEVI TQDNIDYIEA NLRAGLPVQG PDDPEIRMIK
VVRE