Gene Aaci_0877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0877 
Symbol 
ID8424370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp953083 
End bp954459 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content64% 
IMG OID645026990 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003184306 
Protein GI258510872 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCACCA TCACCGTGTC CGCAGGGGAA CCGCGCGGCG GGCGCCGGGC CCTCTTCTTG 
GTCACCATCG CGCTCGGCGT GCTTTTGAAC CCGCTCAACT CGTCCATGAT CTCCGTGGCC
ATGGCCAAAT TCGAACACGT GTTTCATGTC CATTTTACCA CGGCCTCCTG GCTCATCTCC
TCGTATTACC TAGCCAGCGC CGTGGCCCAA CCCATCATGG GCAAGGTGGC CGATCTCGTC
GGTCGAAAAC CTCTGTTTCT CATCGGACTG GCGCTTGTGT CGCTGTCCTG CGCATTGGCC
CCTTTCGCGC CGTCGTTCAC ATGGCTGGTC GTCTTCCGCC TCATTCAGTC GTTGGGGAGC
GGCGCCATCT ATCCCGCGGG CATGGGGATT GTGCGGAACG TCATCACGGA CCGGCAGGCG
CAGGCGCTCG CGTTCTTGTC CGTGTTTTCG TCTGGGGCGG CTGCATTCGG GCCGTCCATT
GGCGGCGTCA TCATGAACTA CCTGGACTGG CAGGGGATCT TTCTCGTCAA CTTTCCGTTT
GTCGTAGCAA GCTTCCTCCT CGCGATTTTT GTGCTGCCTA ACCCCCGCCG CGGCGAGCAC
CAGAGCGCTC GGGAAGTGCT GCGCGAGATC GATCTGCCCG GCATCGCCCT GTTCATCCTT
GCCATCGCCA CGTCGCTCGT GTTTCTGCTG TCCCTCACCG AACGGCCTGC GTGGTGGGCT
GCCGTCACGG GACTTGTGGC GTTCGCAGCC TTCGGGTGGC GGGAGCACGT CGCGCCGAGC
CCGTTCTTGA GCCTGCGCTT TTTCAAGCGG TACACGTCGC TCACCTGGGT GTTGGTGCAG
TTCACCACGG TGAACATCAT CTTCTACTCC ATCTTTTTTG GCATGCCGAC CTATCTGCAG
GAAGTGCGCG GCTTTGACTC GCAGGAGACG GGGCTCATCA TGCTCGCGGT GGCTGGCTTC
AGCCTCATCA CGGCGCCCAT CACGGGGCGC TGGGTGGCTC GCAGCGGCTC TCGACCGCCG
CTCGTCCTCG CCGCTGTGTT CATGACGGCG GGCAGCCTGC TCATGCTGAC CCTGCACACG
GCGTCGCCCG TGTGGTGGCT GTGCGTGGTG TTATCCGTCC TCGGGCTGTC CAACGGCTTC
AACAACGTCG GACTGCAGAC GGCTCTCTTT GCGGCCAGCC CACGCGAGGT CATCAGCACC
GCATCCGGGC TGTTCCAGAT GGCTCGCTAC ATGGGGACCA TCTTGTCGAC GGTCGTCCTC
GGCCTGCTGT TCGGCGCCCG CCTCACAACC TCCGAGTTGC ACGTCCTCGC GGCCGTGCTT
GCGTGCCTTG GAGCCCTGGT CCTCGCGATG AGCCTTCGCC TCCCCCGCCG AGCCTGA
 
Protein sequence
MSTITVSAGE PRGGRRALFL VTIALGVLLN PLNSSMISVA MAKFEHVFHV HFTTASWLIS 
SYYLASAVAQ PIMGKVADLV GRKPLFLIGL ALVSLSCALA PFAPSFTWLV VFRLIQSLGS
GAIYPAGMGI VRNVITDRQA QALAFLSVFS SGAAAFGPSI GGVIMNYLDW QGIFLVNFPF
VVASFLLAIF VLPNPRRGEH QSAREVLREI DLPGIALFIL AIATSLVFLL SLTERPAWWA
AVTGLVAFAA FGWREHVAPS PFLSLRFFKR YTSLTWVLVQ FTTVNIIFYS IFFGMPTYLQ
EVRGFDSQET GLIMLAVAGF SLITAPITGR WVARSGSRPP LVLAAVFMTA GSLLMLTLHT
ASPVWWLCVV LSVLGLSNGF NNVGLQTALF AASPREVIST ASGLFQMARY MGTILSTVVL
GLLFGARLTT SELHVLAAVL ACLGALVLAM SLRLPRRA