| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_0264 |
|---|
| Symbol | |
|---|
| ID | 8423733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | + |
|---|
| Start bp | 290987 |
|---|
| End bp | 292681 |
|---|
| Gene Length | 1695 bp |
|---|
| Protein Length | 564 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 645026375 |
|---|
| Product | 2-isopropylmalate synthase |
|---|
| Protein accession | YP_003183715 |
|---|
| Protein GI | 258510281 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
|---|
| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00392516 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAACG TGAACAAGTA CACCCGCCAG TATTTTCTGC CGCCTGAACC CTGCTTCGAC
TGGGTTCACA AGGACCATGT GGACCGACCG CCGATCTGGT GCAGCGTCGA CCTGCGCGAC
GGAAATCAGG CGCTCATCGT TCCGATGAAT CTCGAGGAGA AGCTTGCGTA CTTTCAACTG
CTCGTCGAGA TCGGCTTCAA GGAGATCGAG GTCGGTTTCC CGGCCGCATC GGACACGGAA
TTCGAGTTCG TCCGGACGCT CATCGAGCGC GATCTCGTCC CGAGCGATGT GACCATCCAG
GTCCTCACGC AATCGCGCGA TCACATCATC GAACGCACTT TTGAAGCCAT TCGCGGGGCC
AAGCGGGCCA TCGTCCATCT CTACAACTCC ACGTCCGTGG CGCAGCGCGA GCAGGTGTTC
CGCGCGGACA AGGACGAGAT CGTGAACATT GCCGTGACCG GCGCCGAACA GATCCGCGAT
CTCGCCCGCA CCACGCCCGG CAACTTCTTC TTCCAATATT CACCGGAGAG CTTCACGGGT
ACGGAGCTCG ACTTCGCGCT CGAGATCTGC AACGCGGTGC TCGACGTGTG GAAACCCACG
CCGGATCGCA AGGTCATCAT CAACCTGCCG GCGACCGTCG AGCTTTCGAT GCCGCACGTG
TACGCGAGCC AGATCGAGTA CATGGGCAAG CGCCTGGCTC GCCGCGATGC CATCGTGCTG
TCCGTGCATC CGCACAACGA TCGCGGCACG GGTGTCGCGG CGGCTGAACT CGCCATGCTC
GCGGGCGCGG AGCGGCTGGA GGGCACGCTG TTTGGGAACG GGGAGCGCAC GGGCAACGTG
GACATCGTCA CGCTCGCGCT GAACCTGTAC TCGCACGGCA TCGATCCGGG GCTCGACTTC
TCCAACCTCC CGGCCATCCA GGCCCGTGTT GAGGCTCTCA CCAAGATGCA GGTGAGCAGG
CGTCACCCGT ACGCGGGGGA ACTCGTCTTC ACGGCGTTTT CGGGATCGCA TCAAGACGCG
ATCGCGAAGG GCATGAAGTG GCGCGAGGAG AAGTCGCCTG AGCATTGGAC GGTCCCGTAT
CTGCCCATCG ACCCGAAGGA TATTGGCCGC GAATACGAGG GGGATATCAT CCGCATCAAC
AGCCAGTCTG GCAAGGGCGG CATCGGCTAC GTGTTGGAGC AATCGCACGG CTTCGATCTG
CCTCCAAAGA TGCGCGAGCA GCTGGGGTAT GCGGTCAAGC GGGTGTCGGA TCGCGAGCAG
AAGGAGCTGT CGGCGGACGA GATCGCCGAG ATCTTCATGC GCGAGTTTGT GAACCTTGGG
CAGCCGCTCG ATCTCGTCGA ACTGACGGGC ACGGATGCGA GAGGGTCGCA CCGCGTGCGC
GCCACGGTGG TCTGGCAGGG CGAGACCGTC GAGATCGAAG GGGCCGGCAA TGGGCGGTTG
GACGCGCTGT GCCATGCGCT GGAGGAGGGG CTCGGGATCC GGGTCGCGAA TCTCACGTAC
AAGGAACATG CGCTGGAAGT AGGGTCGGGA TCGCGAGCGG TGGCTTACAT CAGCGTCGAC
GACGAAGAAG GGAATACCCA CTTCGGGTGC GGCGTGGATA CCGACATTAT GGAGGCGTCG
GCGAAGGCGC TGGTGAGCGC GGTCAATCGA ATGCTGGCGC ACAGGGCGGA GATGGCGGTG
CCCGTGAGCA AATGA
|
|---|
| Protein sequence | MNNVNKYTRQ YFLPPEPCFD WVHKDHVDRP PIWCSVDLRD GNQALIVPMN LEEKLAYFQL
LVEIGFKEIE VGFPAASDTE FEFVRTLIER DLVPSDVTIQ VLTQSRDHII ERTFEAIRGA
KRAIVHLYNS TSVAQREQVF RADKDEIVNI AVTGAEQIRD LARTTPGNFF FQYSPESFTG
TELDFALEIC NAVLDVWKPT PDRKVIINLP ATVELSMPHV YASQIEYMGK RLARRDAIVL
SVHPHNDRGT GVAAAELAML AGAERLEGTL FGNGERTGNV DIVTLALNLY SHGIDPGLDF
SNLPAIQARV EALTKMQVSR RHPYAGELVF TAFSGSHQDA IAKGMKWREE KSPEHWTVPY
LPIDPKDIGR EYEGDIIRIN SQSGKGGIGY VLEQSHGFDL PPKMREQLGY AVKRVSDREQ
KELSADEIAE IFMREFVNLG QPLDLVELTG TDARGSHRVR ATVVWQGETV EIEGAGNGRL
DALCHALEEG LGIRVANLTY KEHALEVGSG SRAVAYISVD DEEGNTHFGC GVDTDIMEAS
AKALVSAVNR MLAHRAEMAV PVSK
|
|---|
| |