Gene Aaci_0246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0246 
Symbol 
ID8423715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp267442 
End bp268557 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content63% 
IMG OID645026357 
ProductMethionine synthase vitamin-B12 independent 
Protein accessionYP_003183697 
Protein GI258510263 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0620] Methionine synthase II (cobalamin-independent) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.489924 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCACG CAAGCCTGGG CCATAAGCCG CCGTTTCGCG CAGATCAGGT GGGCAGCCTG 
CTGCGCCCCG AGCCTGTCAA GGAGGCGCGC CGGCGGTTTT TTGCGGGCGA GATCGACCGC 
GATGCGCTGA CGGCCGTCGA GAACGAAGCG ATTCGCCAGA TCGTCGCGAA GCAGAAAGAG 
GTTGGGTTGG TCGCCGTAAC GGACGGCGAG CTGCGGCGCT CGTGGTGGCA CTTCGATTTC 
CTCGAGCACC TTGACGGCGT GCAGGGCTAC GAGCCCGCGC AGGGCGGCAT TCAGTTCCAC 
AACGTGACCA CCCGCCCGCG CGCCATCCGC GTGGTGGACA AGCTCGGCTT TCCAAAGGAT 
CACCCGATGC TGGCGCACTT CCGCTTCCTG CTCGAAGTCG CGGGTCAGCA CGTGGCGAAA 
ATGACCATCC CGAGCCCCAG CATGCTGCAC TTCCGCGGCG AGATCGCAGA AGGGGTGTAC 
CAAGACGAGG ACGAGATGTT CCATGATCTC GCTCTCACCT ATCAGGACGC CATTCGTGCG 
TTCTACGACG CGGGCTGCCG CTACCTGCAG CTCGACGACA CGGCCTGGGC GTATCTTTGC 
TCGGACGAGC AGAAGCAGCA GATGATGGCC AAAGGGCGGG ACCCGAAGCG ACTCGAGGCC 
AAGTACGCGG AGACCATCAA CAAGGCGCTC GAGGCGAAGC CCGCGGACAT GACCATCACC 
ATGCACATCT GCCGCGGGAA CTTCCGCTCC ACCTGGATTT CGTCTGGAGG CTACGAGCCC 
GTCGCAGAGA CGTTGTTCCA GAAGCTCAAC ATCGACGGGT TCTTCCTCGA ATACGATACA 
GAGCGGGCGG GCGGGTTCGA GCCGCTTCGG TTTGTGAACC GCAAGTCGCT TTTCATCGTG 
CTCGGCCTCA TCACCAGCAA GCACGGCGCG CTCGAGGACA AGGACGAGGT CAAGCGGCGG 
ATCGACGAGG CCACGCGCTA CGTCCCGCTC GACCAACTGT GCCTGAGCCC GCAGTGCGGC 
TTTGCGTCGA CGGAAGAGGG GAATCTGTTG ACCGAAGACG AACAGTGGGC GAAGCAGCGC 
CACGTCGTCG AGATTGCGCA CGAAGTCTGG GGATGA
 
Protein sequence
MSHASLGHKP PFRADQVGSL LRPEPVKEAR RRFFAGEIDR DALTAVENEA IRQIVAKQKE 
VGLVAVTDGE LRRSWWHFDF LEHLDGVQGY EPAQGGIQFH NVTTRPRAIR VVDKLGFPKD 
HPMLAHFRFL LEVAGQHVAK MTIPSPSMLH FRGEIAEGVY QDEDEMFHDL ALTYQDAIRA 
FYDAGCRYLQ LDDTAWAYLC SDEQKQQMMA KGRDPKRLEA KYAETINKAL EAKPADMTIT 
MHICRGNFRS TWISSGGYEP VAETLFQKLN IDGFFLEYDT ERAGGFEPLR FVNRKSLFIV 
LGLITSKHGA LEDKDEVKRR IDEATRYVPL DQLCLSPQCG FASTEEGNLL TEDEQWAKQR 
HVVEIAHEVW G