Gene Aaci_0113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0113 
Symbol 
ID8423579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp132194 
End bp133102 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content55% 
IMG OID645026223 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003183566 
Protein GI258510132 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATTTAC ACCTCTTGAC GGGACACTAC CACCTTATTC CAGGTAACCC GGCAGAAATT 
CTCCTTGGGC AGGACGCAAC GCCGCAGGCA ATCCATGCCT TGGATGCCCA GATGGGGCTC
GACAAGCCCC TGTTGATGCA GTACCTGACA TGGCTGTTGA ACGTATTGCG AGGGGACCTT
GGCACGTCGC TTGTCGACCA CGAACCCGTG TCACAACTTA TCCTGCAGCG TCTGCCCGTT
ACAGTAGAAC TTGCGTTCGG CACGATGATC GTCGCGATTC TCATCGCGTT TCCTCTTGGA
GTCGCGGCTG CTGTCATGAG GGGGCGTGTG GCTGATTTTG TCGCGATGTT TACCGCGACT
GTTGGCATTT CAGTACCTCC TTTCTGGCTG GGAATTTTGT TTTTGCTGCT TTTCACCGTC
AAGTTCCACT TGGTGGCGAA CTCGCTCTAT GTACCGATCT GGCAGGACCC GTTGAAAAAC
CTGGAATGCA TGCTTCTTCC GTGCGTTGCG ACCGGCATCA GGGAGGCTGC CGTACTCTTG
CGCATGTTGC GCTCCAGCCT GATGGACGCA CTTGGTGAGG ACTTTGTGCG GACAGCTTGG
GCAAAGGGCC TTAAGGGAGC TGCGGTCACC TTAAGGCATG CGCTCCCCAA CGCATTGGTC
CCGGTTCTTA CCGCAGGCGG GCTGCAGATA GCCGGGCTGT TGGGTGGATT GGTCATCACG
GAGCAAGTTT TCTCTTTGCC GGGATTTGGG CAACTTTTGG TGCAGAGTGT CTTTAGTCGA
GATTACACTA CCGTGCAGGG TACAGCACTG GTCGCTGCGC TCATTGTCAT CATCGTAAAC
TTGCTTATCG ATCTCACGTA TAGCCGGATC GATCTGCGGA TTCGCACGGA CGGGAGGATG
GAAGCATGA
 
Protein sequence
MNLHLLTGHY HLIPGNPAEI LLGQDATPQA IHALDAQMGL DKPLLMQYLT WLLNVLRGDL 
GTSLVDHEPV SQLILQRLPV TVELAFGTMI VAILIAFPLG VAAAVMRGRV ADFVAMFTAT
VGISVPPFWL GILFLLLFTV KFHLVANSLY VPIWQDPLKN LECMLLPCVA TGIREAAVLL
RMLRSSLMDA LGEDFVRTAW AKGLKGAAVT LRHALPNALV PVLTAGGLQI AGLLGGLVIT
EQVFSLPGFG QLLVQSVFSR DYTTVQGTAL VAALIVIIVN LLIDLTYSRI DLRIRTDGRM
EA